Job Description P0A988 Confidence 99.96% Date Thu Jan 5 11:09:37 GMT 2012 Rank 19 Aligned Residues 120 % Identity 29% Template d1vpka1 SCOP info DNA clamp DNA clamp DNA polymerase III, beta subunit Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	F	T	V	E	R	E	H	L	L	K	P	L	Q	Q	V	S	G	P	L	G	G	R	P	T	L	P	I	L	G	N	L	L	L	Q	V	A	D	G	T	L	S	L	T	G	T	D	L	E	M	E	M	V	A	R	V	A	L	V	Q	P	H	E	P	G	A	T	T	V	P	A	R	K	F	F	D	I	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	V	T	V	T	T	L	E	L	K	D	K	I	T	I	A	S	K	A	L	A	K	K	S	V	K	P	I	L	A	G	F	L	F	E	V	K	D	G	N	F	Y	I	C	A	T	D	L	E	T	G	V	K	A	T	V	N	A	A	E	I	S	G	E	A	R	F	V	V	P	G	D	V	I	Q	K	M	V	K
Template Known Secondary structure																			G	G	G				S	S	S		G	G	G	G								T	T									S	S	S									S				S																T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	E	G	A	E	I	A	V	Q	L	E	G	E	R	M	L	V	R	S	G	R	S	R	F	S	L	S	T	L	P	A	A	D	F	P	N	L	D	D
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		V	L	P	D	E	.	I	T	E	L	S	L	E	G	D	A	L	V	I	S	S	G	S	T	V	F	R	I	T	T	M	P	A	D	E	F	P	E	I	T	P
Template Known Secondary structure		T			S	S	.								T	T							T	T								B			T	T	S
Template Predicted Secondary structure							.
Template SS confidence
		81	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions