Job Description P0A988 Confidence 97.87% Date Thu Jan 5 11:09:37 GMT 2012 Rank 36 Aligned Residues 131 % Identity 13% Template c3l0wA_ PDB info PDB header:replication Chain: A: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: structure of split monoubiquitinated pcna with ubiquitin in2 position two Resolution 2.80 Å

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		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure							.																																																									.	.	.	.	.	.	.
Query SS confidence							.																																																									.	.	.	.	.	.	.
Query Sequence		M	K	F	T	V	.	E	R	E	H	L	L	K	P	L	Q	Q	V	S	G	P	L	G	G	R	P	T	L	P	I	L	G	N	L	L	L	Q	V	A	D	G	T	L	S	L	T	G	T	D	L	E	M	E	M	V	A	R	V	A	L	V	Q	.	.	.	.	.	.	.	P	H	E	P	G	A	T	T	V	P	A
Query Conservation							.																																																									.	.	.	.	.	.	.
Alig confidence							.																	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	K	F	E	E	A	S	L	F	K	R	I	I	D	G	F	K	D	C	V	.	.	.	.	.	.	.	.	.	Q	L	V	N	F	Q	C	K	E	D	G	I	I	A	Q	A	V	D	D	S	R	V	L	L	V	S	L	E	I	G	V	E	A	F	Q	E	Y	R	C	D	H	P	V	T	L	G	M	D	L
Template Known Secondary structure							S													T	T	T		.	.	.	.	.	.	.	.	.	S								T	T									T	T	S	S									G	G	G	S	S					S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																										.	.	.	.								.	.	.	.												.
Query SS confidence																										.	.	.	.								.	.	.	.												.
Query Sequence		R	K	F	F	D	I	C	R	G	L	P	E	G	A	E	I	A	V	Q	L	E	G	E	R	.	.	.	.	M	L	V	R	S	G	R	.	.	.	.	S	R	F	S	L	S	T	L	P	A	A	.	D	F	P	N	L	D	D	W	Q	S	E	V	E	F	T	L	P	Q	A	T	M	K	R	L	I	E
Query Conservation																										.	.	.	.								.	.	.	.												.
Alig confidence																										.	.	.	.								.	.	.	.												.
Template Conservation
Template Sequence		T	S	L	S	K	I	L	R	C	G	N	N	T	D	T	L	T	L	I	A	D	N	T	P	D	S	I	I	L	L	F	E	D	T	K	K	D	R	I	A	E	Y	S	L	K	L	M	D	I	D	A	D	F	L	K	I	E	E	L	Q	Y	D	S	T	L	S	L	P	S	S	E	F	S	K	I	V	R
Template Known Secondary structure										T	T	T	T	T	S								S	S		S									S	S	S	S																						S			S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions