Job Description P0A988 Confidence 100.00% Date Thu Jan 5 11:09:37 GMT 2012 Rank 9 Aligned Residues 221 % Identity 15% Template c3hi8C_ PDB info PDB header:replication Chain: C: PDB Molecule:proliferating cell nuclear antigen pcna; PDBTitle: crystal structure of proliferating cell nuclear antigen2 (pcna) from haloferax volcanii Resolution 3.20 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		T	L	P	Q	A	T	M	K	R	L	I	E	A	T	Q	F	S	M	A	H	Q	D	V	R	Y	Y	L	N	G	M	L	F	E	T	E	G	E	E	L	R	T	V	A	T	D	G	H	R	L	A	V	C	S	M	P	I	G	Q	S	L	.	.	.	.	.	.	P	S	H	S	V	I	V	P	R	K	G	V	I	E
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		I	V	S	A	A	T	L	R	D	A	L	D	S	V	.	.	.	.	.	.	.	.	.	S	V	L	V	D	E	C	K	I	R	L	N	E	E	S	L	S	I	R	A	V	D	P	A	N	V	G	M	V	D	L	T	L	D	A	A	A	F	E	S	Y	E	A	H	G	G	V	I	G	V	N	L	S	R	L	E	E
Template Known Secondary structure					T										G	.	.	.	.	.	.	.	.	.	G	G	T		S	S							S	S							B		T	T	S										T	T	S	B	S					S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.										.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure													.																																						.
Query SS confidence													.																																						.
Query Sequence		L	M	R	M	L	D	G	G	D	N	P	.	L	R	V	Q	I	G	S	N	N	I	R	A	H	V	G	D	F	I	F	T	S	K	L	V	D	G	R	F	P	D	Y	R	R	V	L	P	K	.	N	P	D	K	H	L	E	A	G	C	D	L	L	K	Q	A	F	A	R	A	A	I	L	S	N	E	K	F	R	G
Query Conservation													.																																						.
Alig confidence													.																																						.																											.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	A	G	M	A	G	A	G	D	L	I	H	L	T	L	D	E	E	T	R	K	L	N	I	R	I	D	G	L	S	Y	T	L	A	L	I	D	P	D	S	I	R	Q	E	P	D	I	P	D	L	D	L	A	A	N	I	V	L	E	G	T	H	L	D	R	G	I	K	A	A	D	M	V	S	D	H	.	.	.	.
Template Known Secondary structure			G	G	G	S		T	T	S								S		S	S							T	T								B		G	G	G	S												S	S																	T	T	T	S	S		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.
Predicted Secondary structure																	.													.	.	.	.																										.																			.	.	.
Query SS confidence																	.													.	.	.	.																										.																			.	.	.
Query Sequence		V	R	L	Y	V	S	E	N	Q	L	K	I	T	A	N	.	N	P	E	Q	E	E	A	E	E	I	L	D	.	.	.	.	V	T	Y	S	G	A	E	M	E	I	G	F	N	V	S	Y	V	L	D	V	L	N	A	L	K	.	C	E	N	V	R	M	M	L	T	D	S	V	S	S	V	Q	I	E	.	.	.	D
Query Conservation																	.													.	.	.	.																										.																			.	.	.
Alig confidence																	.													.	.	.	.																										.									.										.	.	.
Template Conservation																																																																				.
Template Sequence		I	R	L	R	V	D	G	A	E	E	T	F	H	I	E	A	E	G	D	T	D	D	V	D	L	S	L	P	P	A	D	L	I	S	I	E	A	G	A	A	D	S	L	F	S	L	D	Y	L	K	D	M	N	K	A	I	P	T	D	A	E	V	T	V	E	L	.	G	E	E	F	P	V	K	L	H	Y	Q	I	A
Template Known Secondary structure								S	S	S	S								B	T	T	B								S	S	S	S	S		B				S							S								T	T			S	S								.		S	S	S									S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230
		352	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	Q	S	A	A	Y	V	V	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	M	G	T	I	T	Y	M	L	A	P
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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