Job Description P0A988 Confidence 98.85% Date Thu Jan 5 11:09:37 GMT 2012 Rank 29 Aligned Residues 217 % Identity 10% Template c3g65B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell cycle checkpoint protein rad1; PDBTitle: crystal structure of the human rad9-rad1-hus1 dna damage2 checkpoint complex Resolution 2.90 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		P	Q	A	T	M	K	R	L	I	E	A	T	Q	F	S	M	A	H	Q	D	V	R	Y	Y	L	N	G	M	L	F	E	T	E	G	E	E	L	R	T	V	A	T	D	G	H	R	L	A	V	C	S	M	P	I	G	Q	S	.	.	.	.	.	.	.	.	L	P	S	H	S	V	I	V	P	R	K	G	V	I	E
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence														.	.						.	.	.	.	.	.	.	.													.																		.	.	.	.	.	.	.	.
Template Conservation														.	.						.	.	.	.	.	.	.	.													.
Template Sequence		N	V	R	N	L	S	T	I	L	K	A	I	.	.	H	F	R	E	H	.	.	.	.	.	.	.	.	A	T	C	F	A	T	K	N	G	I	K	V	.	T	V	E	N	A	K	C	V	Q	A	N	A	F	I	Q	A	G	I	F	Q	E	F	K	V	Q	E	E	S	V	T	F	R	I	N	L	T	V	L	L	D
Template Known Secondary structure			T									T	T	.	.		S	S	S		.	.	.	.	.	.	.	.							S	S					.					T	T	T									T	T	T	S	S						S	S
Template Predicted Secondary structure														.	.						.	.	.	.	.	.	.	.													.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		203	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure												.	.	.	.	.										.	.	.	.									.	.
Query SS confidence												.	.	.	.	.										.	.	.	.									.	.
Query Sequence		L	M	R	M	L	D	G	G	D	N	.	.	.	.	.	P	L	R	V	Q	I	G	S	N	.	.	.	.	N	I	R	A	H	V	G	D	.	.	F	I	F	T	S	K	L	V	D	G	R	F	P	D	Y	R	R	V	L	P	K	N	P	D	K	H	L	E	A	G	C	D	L	L	K	Q	A	F	A	R	A	A
Query Conservation												.	.	.	.	.										.	.	.	.									.	.
Alig confidence												.	.	.	.	.										.	.	.	.									.	.
Template Conservation
Template Sequence		C	L	S	I	F	G	S	S	P	M	P	G	T	L	T	A	L	R	M	C	Y	Q	G	Y	G	Y	P	L	M	L	F	L	E	E	G	G	V	V	T	V	C	K	I	N	T	Q	E	P	E	E	T	L	D	F	D	F	C	S	T	N	V	I	N	K	I	I	L	Q	S	E	G	L	R	E	A	F	S	E	L	D
Template Known Secondary structure				T	T	T		S				T	T											S	S	S	S									T	T																						S	T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.
Predicted Secondary structure																				.	.																			.	.	.	.	.	.					.																						.
Query SS confidence																				.	.																			.	.	.	.	.	.					.																						.
Query Sequence		I	L	S	N	E	K	F	R	G	V	R	L	Y	V	S	E	N	Q	.	.	L	K	I	T	A	N	N	P	E	Q	E	E	A	E	E	I	L	D	.	.	.	.	.	.	V	T	Y	S	.	G	A	E	M	E	I	G	F	N	V	S	Y	V	L	D	V	L	N	A	L	K	.	C	E	N	V	R	M	M	L	T
Query Conservation																				.	.																			.	.	.	.	.	.					.																						.
Alig confidence							.	.	.	.										.	.								.											.	.	.	.	.	.					.																						.
Template Conservation							.	.	.	.																			.
Template Sequence		M	T	S	E	V	.	.	.	.	L	Q	I	T	M	S	P	D	K	P	Y	F	R	L	S	T	F	G	.	N	A	G	S	S	H	L	D	Y	P	K	D	S	D	L	M	E	A	F	H	C	N	Q	T	Q	V	N	R	Y	K	I	S	L	L	K	P	S	T	K	A	L	V	L	S	C	K	V	S	I	R	T	D
Template Known Secondary structure			S		S		.	.	.	.							S	S	S		S								.	S	S									T	T		T	T								S								G	G	G	T	G	G	G					T	T		S
Template Predicted Secondary structure							.	.	.	.																			.
Template SS confidence
		172	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350		.	.	.	.	.	.						.	.	.	360	.	.	.	.
Predicted Secondary structure											.							.	.	.	.	.
Query SS confidence											.							.	.	.	.	.
Query Sequence		D	S	V	S	S	V	Q	I	E	.	D	A	A	S	Q	S	.	.	.	.	.	A	A	Y	V	V	M	P	M
Query Conservation											.							.	.	.	.	.
Alig confidence			.								.							.	.	.	.	.
Template Conservation			.
Template Sequence		N	.	R	G	F	L	S	L	Q	Y	M	I	R	N	E	D	G	Q	I	C	F	V	E	Y	Y	C	C	P	D
Template Known Secondary structure		S	.	S												T	T	S
Template Predicted Secondary structure			.
Template SS confidence
		247		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions