Job Description P0A988 Confidence 99.46% Date Thu Jan 5 11:09:37 GMT 2012 Rank 26 Aligned Residues 202 % Identity 11% Template c3g65A_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:cell cycle checkpoint control protein rad9a; PDBTitle: crystal structure of the human rad9-rad1-hus1 dna damage2 checkpoint complex Resolution 2.90 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																		.	.	.	.																																	.
Query SS confidence																																		.	.	.	.																																	.
Query Sequence		M	L	F	E	T	E	G	E	E	L	R	T	V	A	T	D	G	H	R	L	A	V	C	S	M	P	I	G	Q	S	L	P	.	.	.	.	S	H	S	V	I	V	P	R	K	G	V	I	E	L	M	R	M	L	D	G	G	D	N	P	L	R	V	Q	I	G	S	N	.	N	I	R	A	H	V	G	D	F	I	F
Query Conservation																																		.	.	.	.																																	.
Alig confidence																																		.	.	.	.																								.									.
Template Conservation																																																													.
Template Sequence		L	Y	L	E	P	L	E	D	G	L	S	L	R	T	V	N	S	S	R	S	A	Y	A	C	F	L	F	A	P	L	F	F	Q	Q	Y	Q	A	L	R	C	K	I	L	M	K	S	F	L	S	V	F	R	S	L	A	M	V	E	K	.	C	C	I	S	L	N	G	R	L	V	V	Q	L	H	C	K	F	G	V	R
Template Known Secondary structure								T	T									T	T	S									T	T	S	S																		T	T	T	S	S	T	T					.																G	G	G
Template Predicted Secondary structure																																																													.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																																							.
Query SS confidence																.	.																																																							.
Query Sequence		T	S	K	L	V	D	G	R	F	P	D	Y	R	R	.	.	V	L	P	K	N	P	D	K	H	L	E	A	G	C	D	L	L	K	Q	A	F	A	R	A	A	I	L	S	N	E	K	F	R	G	V	R	L	Y	V	S	E	N	Q	L	K	I	T	A	N	N	P	E	Q	E	.	E	A	E	E	I	L	D	V	T
Query Conservation																.	.																																																							.
Alig confidence																.	.																															.	.	.	.																					.
Template Conservation																																																.	.	.	.
Template Sequence		K	T	H	N	L	S	F	Q	D	C	E	S	L	Q	A	V	F	D	P	A	S	C	P	H	M	L	R	A	P	A	R	V	L	G	E	A	V	L	P	F	S	P	A	L	A	E	.	.	.	.	V	T	L	G	I	G	R	G	R	R	V	I	L	R	S	Y	H	E	T	A	K	A	M	V	T	E	M	C	L	G
Template Known Secondary structure																				G	G	G		S														S	T	T	S		T	T				.	.	.	.							T	T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		310	.								.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																						.	.																			.
Query SS confidence				.	.	.	.	.	.	.																						.	.																			.
Query Sequence		Y	S	.	.	.	.	.	.	.	G	A	E	M	E	I	G	F	N	V	S	Y	V	L	D	V	L	N	A	L	K	.	.	C	E	N	V	R	M	M	L	T	D	S	V	S	S	V	Q	I	E	.	D	A	A	S	Q	S	A	A	Y	V	V	M	P	M
Query Conservation				.	.	.	.	.	.	.																						.	.																			.
Alig confidence				.	.	.	.	.	.	.																						.	.																			.
Template Conservation
Template Sequence		E	E	D	F	Q	Q	L	Q	A	Q	E	G	V	A	I	T	F	C	L	K	E	F	R	G	L	L	S	F	A	E	S	A	N	L	N	L	S	I	H	F	D	A	P	G	R	P	A	I	F	T	I	K	D	S	L	L	D	G	H	F	V	L	A	T	L
Template Known Secondary structure		G	G	G		S						T	T																				T	T									S	T	T	S									S	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions