Return to main results Retrieve Phyre Job Id

Job DescriptionP0A988
Confidence100.00%DateThu Jan 5 11:09:37 GMT 2012
Rank1Aligned Residues366
% Identity100%Templatec1unnA_
PDB info PDB header:beta-clampChain: A: PDB Molecule:dna polymerase iii beta subunit; PDBTitle: complex of beta-clamp processivity factor and little finger2 domain of poliv
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICR
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Template Sequence  MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICR
Template Known Secondary structure 
TGGG
SS
SSGGGGTT
SS

S

B
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  GLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
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Template Conservation   
              
 
        
       

            
    
   
  
  
 
 
  
  
 

  
Template Sequence  GLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
Template Known Secondary structure  S
TT

SSSTT

B
STTS







S
TTGGGS
SS
SSGGGS
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR
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Template Sequence  ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR
Template Known Secondary structure  TT
SS
SS





S
SS

SSTT
B
S
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFN
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Template Conservation 



  


        
 
  
  

 

          
 
      
 
       
   
 
     

   
 

Template Sequence  FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFN
Template Known Secondary structure 


GGGGS
S


TS
TTT
TT
TTS

B

S

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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   321........330.........340.........350.........360......
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Query Sequence  VSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL
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Template Conservation    

 


       
 
       
  
          






Template Sequence  VSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL
Template Known Secondary structure 
SS

TTS
TT

S

B

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   321........330.........340.........350.........360......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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