Job Description P0A988 Confidence 100.00% Date Thu Jan 5 11:09:37 GMT 2012 Rank 8 Aligned Residues 223 % Identity 14% Template c1rwzA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase sliding clamp; PDBTitle: crystal structure of proliferating cell nuclear antigen (pcna) from a.2 fulgidus Resolution 1.80 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		V	E	F	T	L	P	Q	A	T	M	K	R	L	I	E	A	T	Q	F	S	M	A	H	Q	D	V	R	Y	Y	L	N	G	M	L	F	E	T	E	G	E	E	L	R	T	V	A	T	D	G	H	R	L	A	V	C	S	M	P	I	G	Q	S	L	.	.	.	.	.	.	.	P	S	H	S	V	I	V	P	R	K
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		I	D	V	I	M	T	G	E	L	L	K	T	V	T	R	A	I	.	.	.	.	.	.	.	.	.	V	A	L	V	S	E	A	R	I	H	F	L	E	K	G	L	H	S	R	A	V	D	P	A	N	V	A	M	V	I	V	D	I	P	K	D	S	F	E	V	Y	N	I	D	E	E	K	T	I	G	V	D	M	D
Template Known Secondary structure																			.	.	.	.	.	.	.	.	.		T	T		S								T	T									T	T	S	S									G	G	G	S	S					S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.										.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	V	I	E	L	M	R	M	L	D	G	G	D	N	P	L	R	V	Q	I	G	S	N	N	I	R	A	H	V	G	D	F	I	F	T	S	K	L	V	D	G	R	F	P	D	Y	R	R	V	L	P	K	.	N	P	D	K	H	L	E	A	G	C	D	L	L	K	Q	A	F	A	R	A	A	I	L	S	N	E	K
Query Conservation																																																						.
Alig confidence																																																						.																											.
Template Conservation																																																																																	.
Template Sequence		R	I	F	D	I	S	K	S	I	S	T	K	D	L	V	E	L	I	V	E	D	E	S	T	L	K	V	K	F	G	S	V	E	Y	K	V	A	L	I	D	P	S	A	I	R	K	E	P	R	I	P	E	L	E	L	P	A	K	I	V	M	D	A	G	E	F	K	K	A	I	A	A	A	D	K	I	S	D	Q	.
Template Known Secondary structure								T	T	S		T	T	S							S	S	S	S							T	T								B		G	G	G	S												S																			T	T		S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																.	.	.	.																										.																			.	.
Query SS confidence																																.	.	.	.																										.																			.	.
Query Sequence		F	R	G	V	R	L	Y	V	S	E	N	Q	L	K	I	T	A	N	N	P	E	Q	E	E	A	E	E	I	L	D	.	.	.	.	V	T	Y	S	G	A	E	M	E	I	G	F	N	V	S	Y	V	L	D	V	L	N	A	L	K	.	C	E	N	V	R	M	M	L	T	D	S	V	S	S	V	Q	I	E	.	.
Query Conservation																																.	.	.	.																										.																			.	.
Alig confidence		.	.	.																	.											.	.	.	.																										.									.										.	.
Template Conservation		.	.	.																	.																																																	.
Template Sequence		.	.	.	V	I	F	R	S	D	K	E	G	F	R	I	E	A	K	G	.	D	V	D	S	I	V	F	H	M	T	E	T	E	L	I	E	F	N	G	G	E	A	R	S	M	F	S	V	D	Y	L	K	E	F	C	K	V	A	G	S	G	D	L	L	T	I	H	L	.	G	T	N	Y	P	V	R	L	V	F	E
Template Known Secondary structure		.	.	.							T	T									.	S	S									G	G	G	S	S																				G	G	G			T	T								.		S	S	S
Template Predicted Secondary structure		.	.	.																	.																																																	.
Template SS confidence
					152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.
			351	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	A	A	S	Q	S	A	A	Y	V	V	M	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	V	G	G	R	A	K	V	E	Y	I	L	A	P
Template Known Secondary structure			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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