 |
Job Description | P42616 | Confidence | 1.65% | Date | Thu Jan 5 12:01:50 GMT 2012 |
Rank | 75 | Aligned Residues | 62 |
% Identity | 16% | Template | d1lvfa_ |
SCOP info | STAT-like
| t-snare proteins
| t-snare proteins
|
Resolution | 2.10 |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | N | I | L | K | E | I | S | Y | A | E | K | H | Q | N | Q | N | R | I | D | G | L | N | K | A | L | S | E | V | R | A | N | C | S | . |
. |
. |
. |
D | S | Q | L | R | A | D | H | Q | K | K | I | A | K | Q | K | D | E | V | A | E | R | Q | Q | D | L | A | E |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
| . | . | . | . |   |   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |
| . |
|
|   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
I | D | W | T | T | N | E | L | R | N | N | L | R | S | I | E | W | D | L | E | D | . |
L | D | E | T | I | S | I | V | E | A | N | P | R | K | F | N | L | D | A | T | E | L | S | I | R | K | A | F | I | T | S | T | R | Q | I | V | R | D | M | K | D | Q | M | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | S | S | G | G | G | G | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|