Job Description P42616 Confidence 4.99% Date Thu Jan 5 12:01:50 GMT 2012 Rank 24 Aligned Residues 67 % Identity 13% Template c3u1aC_ PDB info PDB header:contractile protein Chain: C: PDB Molecule:smooth muscle tropomyosin alpha; PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	Q	N	Q	N	R	I	D	G	L	N	K	A	L	S	E	V	R	A	N	C	S	D	S	Q	L	R	A	D	H	Q	K	K	I	A	K	Q	K	D	E	V	A	E	R	Q	Q	D	L	A	E	A	K	Q	K	G	D	A	D	K	I	A	K	R	E	R	K	L	A	E	A	Q	E	E	L	K	K	L
Query Conservation
Alig confidence																						.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		K	E	N	A	L	D	R	A	E	Q	A	E	A	D	K	K	A	A	E	E	.	.	.	.	.	.	R	S	K	Q	L	E	D	D	I	V	Q	L	E	K	Q	L	R	V	T	E	D	S	R	D	Q	V	L	.	.	.	.	.	E	E	L	H	K	S	E	D	S	L	L	F	A	E	E	N	A	A	K	A
Template Known Secondary structure																						.	.	.	.	.	.																												.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions