Job Description P42616 Confidence 1.83% Date Thu Jan 5 12:01:50 GMT 2012 Rank 65 Aligned Residues 56 % Identity 7% Template c3onjA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain Resolution 1.92 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	A	D	H	Q	K	K	I	A	K	Q	K	D	E	V	A	E	R	Q	Q	D	L	A	E	A	K	Q	K	G	D	A	D	K	I	A	K	R	E	R	K	L	A	E	A	Q	E	E	L	K	K	L	E	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	L	I	S	Y	E	S	D	F	K	T	T	L	E	Q	A	K	A	S	L	A	E	A	P	S	Q	P	L	S	Q	R	N	T	T	L	K	H	V	E	Q	Q	Q	D	E	L	F	D	L	L	D	Q	M	D	V	E
Template Known Secondary structure																									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions