Job Description P42616 Confidence 3.97% Date Thu Jan 5 12:01:50 GMT 2012 Rank 30 Aligned Residues 71 % Identity 18% Template c3ni0A_ PDB info PDB header:immune system Chain: A: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of mouse bst-2/tetherin ectodomain Resolution 1.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		A	T	T	L	C	Q	E	K	E	Q	N	I	L	K	E	I	S	Y	A	E	K	H	Q	N	.	.	.	.	.	.	.	.	.	Q	N	R	I	D	G	L	N	K	A	L	S	E	V	R	A	N	C	S	D	S	Q	L	R	A	D	H	Q	K	K	I	A	K	Q	K	D	E	V	A	E	R	Q	Q	D	L	A	E
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		A	Q	A	E	C	R	N	T	T	H	L	L	Q	R	Q	L	T	R	T	Q	D	S	L	L	Q	A	E	T	Q	A	N	S	C	N	L	T	V	V	T	L	Q	E	S	L	E	K	K	V	S	.	.	.	.	.	.	Q	A	L	E	Q	Q	A	R	I	K	E	L	E	N	E	V	T	K	L	N	Q	E	L	E	N
Template Known Secondary structure																																																			.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		91	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	K	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	I	Q	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions