Job Description P42616 Confidence 1.46% Date Thu Jan 5 12:01:50 GMT 2012 Rank 90 Aligned Residues 117 % Identity 9% Template c3ajwA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:flagellar flij protein; PDBTitle: structure of flij, a soluble component of flagellar type iii export2 apparatus Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	I	A	L	A	V	S	L	F	A	L	S	A	G	S	Y	A	T	T	L	C	Q	E	K	E	Q	N	I	L	K	E	I	S	Y	A	E	K	H	Q	N	Q	N	R	I	D	G	L	N	K	A	L	S	E	V	R	A	N	C	S	D	S	Q	L	R	A	D	H	Q	K	K	I	A	K	Q	K	D	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	T	L	K	D	L	A	E	K	E	V	D	D	A	A	R	L	L	G	E	M	R	R	G	C	Q	Q	A	E	E	Q	L	K	M	L	I	D	Y	Q	N	E	Y	R	S	N	L	N	M	G	N	G	I	A	S	N	R	W	I	N	Y	Q	Q	F	I	Q	T	L	E	K	A	I	E	Q	H	R	L	Q	L	T
Template Known Secondary structure																																															T					S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		E	R	Q	Q	D	L	A	E	A	K	Q	K	.	.	G	D	A	D	K	I	A	K	R	E	R	K	L	A	E	A	Q	E	E	L	K	K	L	E	A
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		Q	W	T	Q	K	V	D	L	A	L	K	S	W	R	E	K	K	Q	R	L	Q	A	W	Q	T	L	Q	D	R	Q	T	A	A	A	L	L	A	E	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions