Job Description P42616 Confidence 1.85% Date Thu Jan 5 12:01:50 GMT 2012 Rank 62 Aligned Residues 65 % Identity 18% Template c2y44A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:glutamic acid/alanine-rich protein; PDBTitle: crystal structure of garp from trypanosoma congolense Resolution 1.65 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		L	S	E	V	R	A	N	C	S	D	S	Q	L	R	A	D	H	Q	K	K	I	A	K	Q	K	D	E	V	A	E	R	Q	Q	D	L	A	E	A	K	Q	K	G	D	A	.	.	.	.	.	.	.	.	.	D	K	I	A	K	R	E	R	K	L	A	E	A	Q	E	E	L	K	K	L	E
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	E	V	Q	T	M	C	D	V	A	R	Q	L	R	A	L	E	T	A	S	Q	S	A	V	A	A	V	V	S	S	A	R	E	A	S	E	A	K	E	R	A	E	K	A	V	E	R	A	K	S	K	K	R	G	V	D	T	A	T	E	A	A	A	R	A	A	A	A	A	Q	R	A	E
Template Known Secondary structure																	T																																					T	S	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions