Job Description P42616 Confidence 3.02% Date Thu Jan 5 12:01:50 GMT 2012 Rank 44 Aligned Residues 81 % Identity 21% Template c2ke4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4 Resolution UNK

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		F	A	L	S	A	G	S	Y	A	T	T	L	C	Q	E	K	E	Q	N	I	L	K	E	I	S	Y	A	E	K	H	Q	N	Q	N	R	I	D	G	L	N	K	A	L	S	E	V	R	A	N	C	S	D	.	.	.	.	.	.	S	Q	L	R	A	D	H	Q	K	K	I	A	K	Q	K	D	E	V	A	E	R	Q
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																																.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		F	S	H	L	P	P	E	Q	Q	R	K	R	L	Q	Q	Q	L	E	E	R	S	R	E	L	Q	K	E	V	D	Q	.	.	.	.	.	R	E	A	L	K	K	M	K	D	V	Y	E	K	T	P	Q	M	G	D	P	A	S	L	E	P	Q	I	A	E	T	L	S	N	I	E	R	L	K	L	E	V	Q	K	Y	E
Template Known Secondary structure		S	S	S	S																											.	.	.	.	.		T													G	G	G			G	G	G	S
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	L	A	E	A	K	Q	K	G	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	L	A	E	A	E	S	R	V	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions