Return to main results Retrieve Phyre Job Id

Job DescriptionP42616
Confidence6.80%DateThu Jan 5 12:01:50 GMT 2012
Rank16Aligned Residues17
% Identity29%Templatec1r48A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:proline/betaine transporter; PDBTitle: solution structure of the c-terminal cytoplasmic domain2 residues 468-497 of escherichia coli protein prop
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120
Predicted Secondary structure 

Query SS confidence 
















Query Sequence  ERKLAEAQEELKKLEAR
Query Conservation 
 

 


 

   


Alig confidence 
















Template Conservation 



 


 


 

 
Template Sequence  EQKIDDIDHEIADLQAK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
















   7..10.........20...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions