 |
Job Description | P42616 | Confidence | 3.45% | Date | Thu Jan 5 12:01:50 GMT 2012 |
Rank | 38 | Aligned Residues | 50 |
% Identity | 10% | Template | c1gk4A_ |
PDB info |
PDB header:vimentin | Chain: A: PDB Molecule:vimentin; |
PDBTitle: human vimentin coil 2b fragment (cys2)
|
Resolution | 2.3 Å |
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | A | D | H | Q | K | K | I | A | K | Q | K | D | E | V | A | E | R | Q | Q | D | L | A | E | A | K | Q | K | G | D | A | D | K | I | A | K | R | E | R | K | L | A | E | A | Q | E | E | L | K | K |
Query Conservation |   |
  |
|   |
|
|   |   |   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
E | V | D | A | L | K | G | T | N | E | S | L | E | R | Q | M | R | E | M | E | E | N | F | A | V | E | A | A | N | Y | Q | D | T | . |
I | G | R | L | Q | D | E | I | Q | N | M | K | E | E | M | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | |
. | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|