Job Description P0A7W1 Confidence 100.00% Date Thu Jan 5 11:06:20 GMT 2012 Rank 1 Aligned Residues 156 % Identity 47% Template c3bbnE_ PDB info PDB header:ribosome Chain: E: PDB Molecule:ribosomal protein s5; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	Q	E	K	L	I	A	V	N	R	V	S	K	T	V	K	G	G	R	I	F	S	F	T	A	L	T	V	V	G	D	G	N	G	R	V	G	F	G	Y	G	K	A	R	E	V	P	A	A	I	Q	K	A	M	E	K	A	R	R	N	M	I	N	V	A	.	L	N	N	G	T	L	Q	H	P	V	K	G	V	H
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		F	E	E	N	V	V	Q	V	R	R	V	T	K	V	V	K	G	G	K	H	M	R	F	R	A	I	V	V	V	G	D	K	K	G	Q	V	G	V	G	V	G	K	A	K	E	V	V	S	A	V	Q	K	A	A	V	D	A	R	R	N	I	I	T	V	P	M	T	K	Y	L	T	F	P	H	R	N	E	A	D	Y
Template Known Secondary structure																	T	T															S	S	S										S	S											T	T	T	T	S								S	S	S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	S	R	V	F	M	Q	P	A	S	E	G	T	G	I	I	A	G	G	A	M	R	A	V	L	E	V	A	G	V	H	N	V	L	A	K	A	Y	G	S	T	N	P	I	N	V	V	R	A	T	I	D	G	L	E	N	M	N	S	P	E	M	V	A	A	K	R	G	K	S	V	E	E	I	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	A	R	V	M	L	R	P	A	A	P	G	T	G	V	I	A	G	G	A	V	R	T	V	L	E	M	A	G	V	E	N	A	L	G	K	Q	L	G	S	N	N	A	L	N	N	A	R	A	T	I	V	A	V	Q	T	M	R	Q	F	S	D	V	A	R	D	R	G	I	P	M	E	E	L	W	K
Template Known Secondary structure		T	T										T	T							T	T	T					T	T	T	T			B											T	T	T	T	T	T								T									T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions