|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | K | Q | A | G | E | L | Q | E | K | L | I | A | V | N | R | V | S | K | T | V | K | G | G | R | I | F | S | F | T | A | L | T | V | V | G | D | G | N | G | R | V | G | F | G | Y | G | K | A | R | E | V | P | A | A | I | Q | K | A | M | E | K | A | R | R | N | M | I | N | V | A | L | N | N | G | T | L | Q | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |   |
Template Sequence |   |
I | N | P | N | K | L | E | L | E | E | R | V | V | A | V | N | R | V | A | K | V | V | K | G | G | R | R | L | R | F | S | A | L | V | V | V | G | D | K | N | G | H | V | G | F | G | T | G | K | A | Q | E | V | P | E | A | I | R | K | A | I | E | D | A | K | K | N | L | I | E | V | P | I | V | G | T | T | I | P | H |
Template Known Secondary structure |   |
|
| G | G | G | S |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
| S | S |
|
|
|
|
|  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |
|
|
|
| S | S | S |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | K | G | V | H | T | G | S | R | V | F | M | Q | P | A | S | E | G | T | G | I | I | A | G | G | A | M | R | A | V | L | E | V | A | G | V | H | N | V | L | A | K | A | Y | G | S | T | N | P | I | N | V | V | R | A | T | I | D | G | L | E | N | M | N |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|
Template Sequence |   |
E | V | I | G | H | F | G | A | G | E | I | I | L | K | P | A | S | E | G | T | G | V | I | A | G | G | P | A | R | A | V | L | E | L | A | G | I | S | D | I | L | S | K | S | I | G | S | N | T | P | I | N | M | V | R | A | T | F | D | G | L | K | Q | L | K |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| T | T | S |
|
|
| S |
|  |  |  |  |  |  | T | T | T | T | T |
|
| S |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |