Return to main results Retrieve Phyre Job Id

Job DescriptionP28905
Confidence49.17%DateThu Jan 5 11:45:19 GMT 2012
Rank19Aligned Residues94
% Identity13%Templated1gm5a4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.24

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70... ......80.......
Predicted Secondary structure 






















.........









..
Query SS confidence 






















































. . . . . . . . .













. .
Query Sequence  SAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEG. . . . . . . . . PRGGAPVEIAWPQK. .
Query Conservation         


  

   
 

 
   
   
  

  


    




      .........     

 
     ..
Alig confidence 






















































.........













..
Template Conservation    
   
   
   
    




   
     
   
   
  
   

      
      
  
   


 
 
   
Template Sequence  MDRVNEVYEFVRQEVMRGGQAFIVYPLIKSAVEMYEYLSKEVFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEV
Template Known Secondary structure  SSTTTTS

B

B




SGGGS


B



SSS

S
STTTSSSB


SS


S
Template Predicted Secondary structure 




















Template SS confidence 















































































   561........570.........580.........590.........600.........610.........620.........630.........640
 
   88.90.........100.........110..
Predicted Secondary structure  .















Query SS confidence  .
























Query Sequence  . RSSSRRDILISLRTSFADFATAFTE
Query Conservation  .       




    
     
 
Alig confidence  .
























Template Conservation 



  
  

             
 
Template Sequence  GIDVPRANVMVIENPERFGLAQLHQL
Template Known Secondary structure 
S

TT

B
S
SSS
TT
Template Predicted Secondary structure 












Template SS confidence 

























   652.......660.........670.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions