Job Description P28905 Confidence 10.59% Date Thu Jan 5 11:45:19 GMT 2012 Rank 97 Aligned Residues 84 % Identity 14% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure															.	.																																																																	.
Query SS confidence															.	.																																																																	.
Query Sequence		V	C	E	I	A	A	E	R	W	R	S	G	K	.	.	R	V	L	I	A	C	E	D	E	K	Q	A	Y	R	L	D	E	A	L	W	A	R	P	A	E	S	F	V	P	H	N	L	A	G	E	G	P	R	G	G	A	P	V	E	I	A	W	P	Q	K	R	S	S	S	R	R	D	I	L	I	S	L	R	T	.
Query Conservation															.	.																																																																	.
Alig confidence															.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V
Template Known Secondary structure													T	T									S							T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S						G	G	G							T		S						S	S	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																							.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
										102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	F	A	D	F	A	T	A	F	T	E	V	V	D	F	V	P	Y	E	D	S	L	K	Q	L	A	R	E	R
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	K	G	E	E	L	P	V	S	D	D	S	L	K	N	L	S	L	V	Y	D	V	I	Y	F	D	T	P	L	V	V	K	A	R	K	L
Template Known Secondary structure		T	T	T	S				S							T	T		S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions