Job Description P28905 Confidence 34.47% Date Thu Jan 5 11:45:19 GMT 2012 Rank 36 Aligned Residues 115 % Identity 14% Template c3i32A_ PDB info PDB header:rna binding protein,hydrolase Chain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: dimeric structure of a hera helicase fragment including the c-terminal2 reca domain, the dimerization domain, and the rna binding domain Resolution 2.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.
Query Sequence		V	D	G	L	S	A	V	E	Q	L	V	C	E	I	A	A	E	R	W	R	S	G	K	R	V	L	I	A	C	E	D	E	K	Q	A	Y	R	L	D	E	A	L	W	A	R	P	A	E	S	F	V	P	H	N	L	A	G	E	G	.	.	.	.	.	.	.	.	.	P	R	G	G	A	P	V	E	I	A	W	P
Query Conservation																																																													.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		P	A	P	V	R	G	R	L	E	V	L	S	D	L	L	Y	V	A	.	.	S	P	D	R	A	M	V	F	T	R	T	K	A	E	T	E	E	I	A	Q	G	L	L	R	L	G	H	P	A	Q	A	L	H	G	D	M	S	Q	G	E	R	E	R	V	M	G	A	F	R	Q	G	E	V	R	V	L	V	A	T	D
Template Known Secondary structure					S	S	S													.	.			S	S						S	S													T	T	T								S				T													T	S								S
Template Predicted Secondary structure																				.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
					86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.																	.	.												.	.	.	.
Query SS confidence		.	.	.																	.	.												.	.	.	.
Query Sequence		.	.	.	Q	K	R	S	S	S	R	R	D	I	L	I	S	L	R	T	.	.	S	F	A	D	F	A	T	A	F	T	E	.	.	.	.	V	V	D	F	V	P	Y	E	D	S	L	K	Q	L	A	R	E	R	Y
Query Conservation		.	.	.																	.	.												.	.	.	.
Alig confidence		.	.	.																	.	.												.	.	.	.
Template Conservation
Template Sequence		V	A	A	R	G	L	D	I	P	Q	V	D	L	V	V	H	Y	R	M	P	D	R	A	E	A	Y	Q	H	R	S	G	R	T	G	G	R	V	V	L	L	Y	G	P	R	E	R	R	D	V	E	A	L	E	R	A
Template Known Secondary structure		T	T	T		S	T	T					S					S	S			S	S	T	T							T												S	S	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions