Return to main results Retrieve Phyre Job Id

Job DescriptionP28905
Confidence36.50%DateThu Jan 5 11:45:19 GMT 2012
Rank30Aligned Residues50
% Identity18%Templatec3dinB_
PDB info PDB header:membrane protein, protein transportChain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70..
Predicted Secondary structure 





















Query SS confidence 





















































Query Sequence  SAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGE
Query Conservation         


  

   
 

 
   
   
  

  


    




     
Alig confidence 





































....











Template Conservation    
  

  

      







 

  

 

  
....   

 
 



Template Sequence  KEKYEKIVEEIEKRYKKGQPVLVGTTSIEKSELLSSML. . . . KKKGIPHQVLNA
Template Known Secondary structure  TTT

SS....T



SS
Template Predicted Secondary structure 





....





Template SS confidence 





















































   457..460.........470.........480.........490.... .....500......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions