Return to main results Retrieve Phyre Job Id

Job DescriptionP28905
Confidence12.30%DateThu Jan 5 11:45:19 GMT 2012
Rank86Aligned Residues40
% Identity25%Templatec2ipcB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of the translocation atpase seca from thermus2 thermophilus reveals a parallel, head-to-head dimer
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50......
Predicted Secondary structure 





Query SS confidence 







































Query Sequence  GLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEAL
Query Conservation           


  

   
 

 
   
   
  

  
Alig confidence 







































Template Conservation 
   
  

  

      







 


 

 

  
Template Sequence  TEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQML
Template Known Secondary structure  ST


SS
Template Predicted Secondary structure 






Template SS confidence 







































   424.....430.........440.........450.........460...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions