Job Description P28905 Confidence 10.96% Date Thu Jan 5 11:45:19 GMT 2012 Rank 94 Aligned Residues 74 % Identity 28% Template c1zq1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																								.	.									.	.
Query SS confidence																																								.	.									.	.
Query Sequence		M	K	N	A	T	F	Y	L	L	D	N	D	T	T	V	D	G	L	S	A	V	E	Q	L	V	C	E	I	A	A	E	R	W	R	S	G	K	R	.	.	V	L	I	A	C	E	D	E	.	.	K	Q	A	Y	R	L	D	E	A	L	W	A	R	P	A	E	S	F	V	P	H	N	L	A	G	E	G	P	R	G
Query Conservation																																								.	.									.	.
Alig confidence																																								.	.									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	N	V	K	P	K	L	L	F	N	I	F	S	E	D	X	K	P	K	H	W	V	K	I	A	H	E	V	A	K	A	L	N	S	G	D	Y	G	V	V	V	A	H	G	T	D	T	X	G	Y	T	A	A	A	L	S	F	X	L	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure		T	S												G	G	G																				T		S								T	T	T												S	B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																		.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	P	V	E	I	A	W	P	Q	K	R	S	S	S	R
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		G	K	P	V	V	L	V	.	G	A	Q	R	S	S	D	R
Template Known Secondary structure			S						.			S	S		T	T	S
Template Predicted Secondary structure									.
Template SS confidence
		196	.	.	.	200	.	.		.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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