Job Description P28905 Confidence 15.57% Date Thu Jan 5 11:45:19 GMT 2012 Rank 72 Aligned Residues 78 % Identity 14% Template c1gm5A_ PDB info PDB header:helicase Chain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction Resolution 3.24 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		V	C	E	I	A	A	E	R	W	R	S	G	K	R	V	L	I	A	C	E	D	E	K	Q	A	Y	R	L	D	E	A	L	W	A	R	P	A	E	S	F	V	P	H	N	L	A	G	E	G	.	.	.	.	.	.	.	.	.	P	R	G	G	A	P	V	E	I	A	W	P	.	.	.	Q	K	R	S	S	S	R
Query Conservation																																																			.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		V	Y	E	F	V	R	Q	E	V	M	R	G	G	Q	A	F	I	V	Y	P	L	I	K	S	A	V	E	M	Y	E	Y	L	S	K	E	V	F	K	L	G	L	M	H	G	R	L	S	Q	E	E	K	D	R	V	M	L	E	F	A	E	G	R	Y	D	I	L	V	S	T	T	V	I	E	V	G	I	D	V	P	R
Template Known Secondary structure										T	T	T	S			B			B													S	G	G	G	S				B					S	S	S			S		S								T	T	T	S	S	S	B				S	S				S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	L	I	S	L	R	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	V	M	V	I	E	N	P	E
Template Known Secondary structure							B		S		S
Template Predicted Secondary structure
Template SS confidence
		658	.	660	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions