Return to main results Retrieve Phyre Job Id

Job DescriptionP28905
Confidence21.55%DateThu Jan 5 11:45:19 GMT 2012
Rank57Aligned Residues120
% Identity13%Templatec1gl9B_
PDB info PDB header:topoisomeraseChain: B: PDB Molecule:reverse gyrase; PDBTitle: archaeoglobus fulgidus reverse gyrase complexed with adpnp
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTS
Query Conservation     


  

   
 

 
   
   
  

  


    




           

 
            




   
Alig confidence 















































































Template Conservation     

  
     
 
 









 
    
  
     
     
    
                 



 

 
Template Sequence  SFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQF
Template Known Secondary structure  TTT

SSTTT



TTT
S


TTTTS
S
Template Predicted Secondary structure 




















Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   103......110... ......120.........130.........140..
Predicted Secondary structure 





.








Query SS confidence 










.




























Query Sequence  FADFATAFTEV. VDFVPYEDSLKQLARERYKAYRVAGFNLN
Query Conservation   
     
 

.

 
  
      

 
 
 

  
  
 
Alig confidence 










.




























Template Conservation 
      
  
  






 

            


   
Template Sequence  LSKHYRELGHFDFIFVDDVDAILKASKNVDKLLHLLGFHYD
Template Known Secondary structure  SSSS


SS
STST


B
Template Predicted Secondary structure 















Template SS confidence 








































   166...170.........180.........190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions