Job Description P0A9D2 Confidence 100.00% Date Thu Jan 5 11:09:55 GMT 2012 Rank 17 Aligned Residues 186 % Identity 23% Template c3lykA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae Resolution 2.10 Å

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		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	L	F	Y	K	P	.	G	A	C	S	L	A	S	H	I	T	L	R	E	S	G	K	D	F	T	L	V	S	V	D	L	M	K	K	R	L	E	N	G	D	D	Y	F	A	V	N	P	K	G	Q	V	P	A	L	L	L	D	D	G	T	L	L	T	E	G	V	A	I	M	Q	Y	L	A	D	S	V	P	D	R
Query Conservation								.
Alig confidence								.																												.	.	.	.																					.
Template Conservation																																				.	.	.	.																					.
Template Sequence		T	L	F	S	N	K	D	D	I	Y	C	H	Q	V	K	I	V	L	A	E	K	G	V	L	Y	E	N	A	E	V	D	L	Q	A	.	.	.	.	L	P	E	D	L	X	E	L	N	P	Y	G	T	V	P	T	L	V	D	R	.	D	L	V	L	F	N	S	R	I	I	X	E	Y	L	D	E	R	F	P	H	P
Template Known Secondary structure							T	T															T										T	T	S	.	.	.	.										T	T			S						T	.	T					S												S		S	S
Template Predicted Secondary structure																																				.	.	.	.																					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	A	P	V	N	S	I	S	R	Y	K	T	I	E	W	L	N	Y	I	A	T	E	L	H	K	G	F	T	P	L	F	R	P	D	T	P	E	E	Y	K	P	T	V	R	A	Q	L	E	K	K	L	Q	Y	V	N	E	A	L	K	D	E	H	W	I	C	G	Q	R	F	T	I	A	D	A	Y	L	F	T
Query Conservation
Alig confidence				.																														.	.
Template Conservation				.																														.	.
Template Sequence		P	L	.	X	Q	V	Y	P	V	S	R	A	K	D	R	L	L	X	L	R	I	E	Q	D	W	Y	P	T	L	A	K	A	.	.	E	N	G	T	E	K	E	K	T	S	A	L	K	Q	L	K	E	E	L	L	G	I	A	P	I	F	Q	Q	X	P	Y	F	X	N	E	E	F	G	L	V	D	C	Y	V	A	P
Template Known Secondary structure				.	S		S	S																		T								.	.			S																			T							S	S	B	T	T	B	S	S
Template Predicted Secondary structure				.																														.	.
Template SS confidence
		87	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		V	L	R	W	A	Y	A	V	K	L	N	.	.	L	E	G	L	E	H	I	A	A	F	M	Q	R	M	A	E	R	P	E	V	Q	D	A	L
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		L	L	W	K	L	K	H	L	G	V	E	F	T	G	T	G	S	K	A	I	K	A	Y	X	E	R	V	F	T	R	D	S	F	L	Q	S	V
Template Known Secondary structure								T	T	T					S	T	T													T	S							T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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