Job Description P0A9D2 Confidence 99.90% Date Thu Jan 5 11:09:55 GMT 2012 Rank 87 Aligned Residues 153 % Identity 20% Template c2uz8A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:eukaryotic translation elongation factor 1 PDBTitle: the crystal structure of p18, human translation elongation2 factor 1 epsilon 1 Resolution 2.0 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	S	H	I	T	L	R	E	S	G	K	D	F	T	L	V	S	V	D	L	M	K	K	R	L	E	N	G	D	D	Y	F	A	V	N	P	K	G	Q	V	P	A	L	L	L	D	D	G	T	L	L	T	E	G	V	A	I	M	Q	Y	L	A	D	S	V	P	D	R	Q	L	L	A	P	V	N	S	I	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	A	E	L	S	L	L	E	K	S	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	G	N	K	Y	S	A	Q	G	E	R	Q	I	P	V	L	Q	T	N	N	G	P	S	L	X	G	L	T	T	I	A	A	H	L	V	K	Q	A	N	K	E	Y	L	L	G	S	T	A	E	E	K
Template Known Secondary structure														T	T		.	.	.	.	.	.	.	.	.	.	.	.	.		S								T	T	T	T							S	S						S												T	T		G	G	G	G		S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.														.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	K	T	I	E	W	L	N	Y	I	A	T	E	L	H	K	G	F	T	P	L	F	R	P	D	T	P	E	E	Y	K	P	T	V	R	A	Q	L	E	K	K	L	Q	Y	V	N	E	A	L	K	D	E	H	W	I	C	G	Q	R	F	T	I	A	D	A	Y	L	F	T	V	L	R	W	A	Y	A	V	K	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	X	V	Q	Q	W	L	E	Y	R	V	T	Q	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	I	H	T	L	L	X	D	L	N	S	Y	L	E	D	K	V	Y	L	T	G	Y	N	F	T	L	A	D	I	L	L	Y	Y	G	L	H	R	F	I	V	D	L	T
Template Known Secondary structure															T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														G	G	G		S	S	T	T	S	S	S																	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.																						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		171			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		N	.	.	L	E	G	L	E	H	I	A	A	F	M	Q	R	M	A	E	R	P	E	V	Q	D	A	L	S	A
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		V	Q	E	K	E	K	Y	L	N	V	S	R	W	F	C	H	I	Q	H	Y	P	G	I	R	Q	H	L	S	S
Template Known Secondary structure								T													S	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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