Job Description P0A9D2 Confidence 99.94% Date Thu Jan 5 11:09:55 GMT 2012 Rank 86 Aligned Residues 181 % Identity 22% Template c1z9hB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:membrane-associated prostaglandin e synthase-2; PDBTitle: microsomal prostaglandin e synthase type-2 Resolution 2.60 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure									.																																																			.	.	.
Query SS confidence									.																																																			.	.	.
Query Sequence		M	K	L	F	Y	K	P	.	G	A	C	S	L	A	S	H	I	T	L	R	E	S	G	K	D	F	T	L	V	S	V	D	L	M	K	K	R	L	E	N	G	D	D	Y	F	A	V	N	P	K	G	Q	V	P	A	L	L	L	.	.	.	D	D	G	T	L	L	T	E	G	V	A	I	M	Q	Y	L	A	D	S
Query Conservation									.																																																			.	.	.
Alig confidence									.																															.	.	.	.	.	.															.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		L	T	L	Y	Q	Y	K	T	C	P	F	C	S	K	V	R	A	F	L	D	F	H	A	L	P	Y	Q	V	V	E	V	N	P	V	L	R	A	E	.	.	.	.	.	.	I	K	F	S	S	Y	R	K	V	P	I	L	V	A	Q	E	G	E	S	S	Q	Q	L	N	D	S	S	V	I	I	S	A	L	K	T	Y
Template Known Secondary structure								T	T														T	T										T	T	T		G	G	.	.	.	.	.	.	G	T	T		S			S	S								T	T							S
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		77	.	.	80	.	.	.																																							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	D	R	Q	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	V	N	S	I	S	R	Y	K	T	I	E	W	L	N	Y	I	A	T	E	L	H	K	G	F	T	P	L	F	R	P	D	T	P
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	S	G	Q	P	L	E	E	I	I	T	Y	Y	P	A	M	K	A	V	N	D	Q	G	K	E	V	T	E	F	G	N	K	Y	W	L	M	L	N	E	K	E	A	Q	Q	V	Y	S	G	K	E	A	R	T	E	E	M	K	W	R	Q	W	A	D	D	W	L	V	H	L	I	S	P	N	V	Y	R	T	P	T
Template Known Secondary structure												G	G	G	S								T	T	S							T	T	T	T														S	S																	T	T	G	G	G	T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		119	120	.	.																																											.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	V	R	A	Q	L	E	K	K	L	Q	Y	V	N	E	A	L	K	D	E	H	W	I	C	G	Q	R	F	T	I	A	D	A
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	A	S	F	D	Y	I	V	R	E	G	K	F	G	A	V	E	G	A	V	A	K	Y	M	G	A	A	A	M	Y	L	I	S	K	R	L	K	S	R	H	R	L	Q	D	N	V	R	E	D	L	Y	E	A	A	D	K	W	V	A	A	V	G	K	D	R	P	F	M	G	G	Q	K	P	N	L	A	D	L
Template Known Secondary structure														S																													T	T			S	S																		S	S		S	B	T	T	B	T	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		Y	L	F	T	V	L	R	W	A	Y	A	V	K	.	.	L	N	L	E	G	L	E	H	I	A	A	F	M	Q	R	M	A	E
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		A	V	Y	G	V	L	R	V	M	E	G	L	D	A	F	D	D	L	M	Q	H	T	H	I	Q	P	W	Y	L	R	V	E	R
Template Known Secondary structure									T	T	T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions