Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9D2
Confidence100.00%DateThu Jan 5 11:09:55 GMT 2012
Rank30Aligned Residues188
% Identity14%Templatec1iyiA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:hematopoietic prostagladin d synthase; PDBTitle: crystal structure of hematopoietic prostaglandin d synthase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1...... ..10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 




.

































Query SS confidence 






.







































































Query Sequence  MKLFYKP. GACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD
Query Conservation 
 

   .   
  


 
   

      
                

   

 
          
  
  

      
Alig confidence 






.



























.....

















.



















Template Conservation   

 
         

  
   

 

         .....       
 
 

 
   .   
 

 

  

      
Template Sequence  YKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADW. . . . . PEIKSTLPFGKIPILEVD. GLTLHQSLAIARYLTKNTDL
Template Known Secondary structure  SSSGGGTT



GGG.....TTSTTS
S
T.T
TTSTT
Template Predicted Secondary structure 










.....









.


Template SS confidence 















































































   4.....10.........20.........30......... 40.........50....... ..60.........70.......
 
   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  RQLLAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLF
Query Conservation                                                   
   
  

  
       
   
 

  
 
Alig confidence 

































...










































Template Conservation                                    ...            
   
  

  
       
   
 

  
 
Template Sequence  AGNTEMEQCHVDAIVDTLDDFMSCFPWAEKKQDV. . . KEQMFNELLTYNAPHLMQDLDTYLGGREWLIGMSVTWADFYWE
Template Known Secondary structure  S
SSTTS
TT
S
...TTT
SSSSTTS

Template Predicted Secondary structure 








...











Template SS confidence 















































































   78.80.........90.........100.........110. ........120.........130.........140.........150....
 
   160.........170. ........180.........190.......
Predicted Secondary structure 



.


Query SS confidence 











.

























Query Sequence  TVLRWAYAVKLN. LEGLEHIAAFMQRMAERPEVQDALSA
Query Conservation    
         .
   
 
     
    
     
  
Alig confidence 











.

























Template Conservation    
              
 
     
    
 

     
Template Sequence  ICSTTLLVFKPDLLDNHPRLVTLRKKVQAIPAVANWIKR
Template Known Secondary structure 
TTTTTT
S
Template Predicted Secondary structure 







Template SS confidence 






































   155....160.........170.........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions