Return to main results Retrieve Phyre Job Id

Job DescriptionP77173
Confidence10.52%DateThu Jan 5 12:25:58 GMT 2012
Rank58Aligned Residues28
% Identity21%Templatec3dgpB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:rna polymerase ii transcription factor b subunit 5; PDBTitle: crystal structure of the complex between tfb5 and the c-terminal2 domain of tfb2
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   301........310.........320........
Predicted Secondary structure 








Query SS confidence 



























Query Sequence  LDDQRRMMTPQKLREYQDIIREVKDANA
Query Conservation   

 
  

       
  
        
Alig confidence 



























Template Conservation 







       

 

   
  
 
Template Sequence  LDDTHLLVNPSKVEFVKHELNRLLSKNI
Template Known Secondary structure  TT
GGGS
S
Template Predicted Secondary structure 





Template SS confidence 



























   35....40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions