Job Description P0A9U1 Confidence 100.00% Date Thu Jan 5 11:11:22 GMT 2012 Rank 42 Aligned Residues 347 % Identity 18% Template c3gd7C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		N	D	A	V	I	T	L	N	G	L	E	K	R	F	P	G	M	D	K	P	A	V	A	P	L	D	C	T	I	H	A	G	Y	V	T	G	L	V	G	P	D	G	A	G	K	T	T	L	M	R	M	L	A	G	L	L	K	P	D	S	G	S	A	T	V	I	G	F	D	P	I	K	.	N	D	G	A	L	H	A
Query Conservation																																																																										.
Alig confidence																																																										.																.
Template Conservation																																																										.
Template Sequence		S	G	G	Q	M	T	V	K	D	L	T	A	K	Y	T	E	G	G	N	A	I	L	E	N	I	S	F	S	I	S	P	G	Q	R	V	G	L	L	G	R	T	G	S	G	K	S	T	L	L	S	A	F	L	R	L	L	.	N	T	E	G	E	I	Q	I	D	G	V	S	W	D	S	I	T	L	E	Q	W	R	K
Template Known Secondary structure			S												S	S	T	T	S													T	T									T	T	S	S									T	T		S	.									T	T			S	S	S	S						G	G
Template Predicted Secondary structure																																																										.
Template SS confidence
		1206	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.												.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	G	Y	M	P	Q	K	F	G	L	Y	E	D	L	T	V	M	E	N	L	N	L	Y	A	D	L	R	S	V	T	G	E	A	R	K	Q	T	F	A	R	L	L	E	F	T	S	L	G	P	F	T	.	.	.	.	.	.	.	.	.	.	.	G	R	L	A	G	K	L	S	G	G	M	K	Q	K	L	G	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.														.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.														.	.	.	.	.	.	.
Template Sequence		A	F	G	V	I	P	Q	K	V	F	I	F	S	G	.	T	F	R	K	N	L	D	P	N	A	A	H	S	.	.	.	.	.	.	.	D	Q	E	I	W	K	V	A	D	E	V	G	L	R	S	V	I	E	Q	F	P	G	K	L	D	F	V	L	V	D	G	G	C	V	L	S	H	G	H	K	Q	L	M	C	L
Template Known Secondary structure		G					S							S	S	.	B							T	T	S		S		.	.	.	.	.	.	.									T	T	T	T		T	T	T	G	G	G	S	T	T	G	G	G		B			T	T	T	T	T	S
Template Predicted Secondary structure																.														.	.	.	.	.	.	.
Template SS confidence
		1285	.	.	.	.	1290	.	.	.	.	.	.	.	.		.	1300	.	.	.	.	.	.	.	.	.	1310	.								.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	C	T	L	V	G	E	P	K	V	L	L	L	D	E	P	G	V	G	V	D	P	I	S	R	R	E	L	W	Q	M	V	H	E	L	A	G	E	G	M	L	I	L	W	S	T	S	Y	L	D	E	A	.	E	Q	C	R	D	V	L	L	M	N	E	G	E	L	L	Y	Q	G	E	P	K	A	L	T	Q	T	M
Query Conservation																																																						.
Alig confidence																																				.	.																	.
Template Conservation																																				.	.
Template Sequence		A	R	S	V	L	S	K	A	K	I	L	L	L	D	E	P	S	A	H	L	D	P	V	T	Y	Q	I	I	R	R	T	L	K	Q	.	.	A	F	A	D	C	T	V	I	L	C	E	A	R	I	E	A	M	L	E	C	D	Q	F	L	V	I	E	E	N	K	V	R	Q	Y	D	S	I	L	E	L	Y	H	Y	P
Template Known Secondary structure							T	T								S					S															.	.	T	T	T	T	S							S	S	G	G	G	S	T	T		S							S	S						S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		1357	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390			.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	S	F	L	M	T	S	P	H	E	G	N	R	K	L	L	Q	R	A	L	K	L	P	Q	V	S	D	G	M	I	Q	G	K	S	V	R	L	I	L	K	K	E	A	T	P	D	D	I	R	H	A	D	G	M	P	E	I	N	I	N	E	T	T	P	R	F	E	D	A	F	I	D	L	L	G	G	A	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	R	F	V	A	G	F	I	G	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	N	F	L	P	V	K	V	T	A	T	A	I	D	Q	V	Q	V	E	L	P	M	P	N	R
Template Known Secondary structure		S	B					T	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T							S	S	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1435	.	.	.	.	1440	.	.	.	.	.	.																																											.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		T	S	E	S	P	L	G	A	I	L	H	T	V	E	G	T	P	G	E	T	V	I	E	A	K	E	L	T	K	K	F	G	D	F	A	A	T	D	H	.	V	N	F	A	V	K	R	G	E	I	F	G	L	L	G	P	N	G	A	G	K	S	T	T	F	K	M	M	C	G	L	L	V	P	T	S	G	Q	A	L
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		Q	Q	V	W	L	P	V	E	S	R	D	V	Q	V	G	A	N	M	S	L	G	I	R	P	E	H	L	L	P	S	D	I	A	D	V	I	L	E	G	E	V	Q	V	V	E	Q	L	G	N	E	T	Q	I	H	I	Q	I	P	S	I	R	Q	N	L	V	Y	R	Q	N	D	V	V	L	V	E	E	G	A	T	F
Template Known Secondary structure							S	B			T	T			T	T									T	T	T				G	G	G		S	S													S	S									T	T		S	S								S						T	T
Template Predicted Secondary structure
Template SS confidence
		1473	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	M	D	L	K	E	S	S	G	K	A	R	Q	H	L	G	Y	M	A	Q	K	F	S	L	Y	G	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	L	P	P	E	R	C	H	L	F	R	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G						T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	1553	.	.	.	.	.	.	1560	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions