Job Description P0A9U1 Confidence 100.00% Date Thu Jan 5 11:11:22 GMT 2012 Rank 12 Aligned Residues 228 % Identity 31% Template c2yyzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein Resolution 2.11 Å

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	E	A	K	E	L	T	K	K	F	G	D	F	A	A	T	D	H	V	N	F	A	V	K	R	G	E	I	F	G	L	L	G	P	N	G	A	G	K	S	T	T	F	K	M	M	C	G	L	L	V	P	T	S	G	Q	A	L	V	L	G	M	D	L	K	E	S	S	G	K	A	R	Q	H	L	G	Y	M
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		P	S	I	R	V	V	N	L	K	K	Y	F	G	K	V	K	A	V	D	G	V	S	F	E	V	K	D	G	E	F	V	A	L	L	G	P	S	G	C	G	K	T	T	T	L	L	M	L	A	G	I	Y	K	P	T	S	G	E	I	Y	F	D	D	V	L	V	N	D	I	P	P	K	Y	R	E	.	V	G	M	V
Template Known Secondary structure														T	T													T	T								S	T	T	S	S										T	S	S			S							T	T				T	T	S		G	G	G	T	T	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	K	F	S	L	Y	G	N	L	T	V	E	Q	N	L	R	F	F	S	G	V	Y	G	L	R	G	R	A	Q	N	E	K	I	S	R	M	S	E	A	F	G	L	K	S	I	A	S	H	A	T	D	E	L	P	L	G	F	K	Q	R	L	A	L	A	C	S	L	M	H	E	P	D	I	L	F	L	D	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	N	Y	A	L	Y	P	H	M	T	V	F	E	N	I	A	F	P	L	R	A	R	R	I	S	K	D	E	V	E	K	R	V	V	E	I	A	R	K	L	L	I	D	N	L	L	D	R	K	P	T	Q	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	V	K	Q	P	K	V	L	L	F	D	E	P
Template Known Secondary structure			S	S					T	T	S								G	G	G	S	S	S		S					T	T										T	T		G	G	G	T	T	S		G	G	G	S															T	T			S						S	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																								.															.
Query SS confidence																								.															.
Query Sequence		T	S	G	V	D	P	L	T	R	R	E	F	W	L	H	I	N	S	M	V	E	K	.	G	V	T	V	M	V	T	T	H	F	M	D	E	A	.	E	Y	C	D	R	I	G	L	V	Y	R	G	K	L	I	A	S	G	T	P	D	D	L	K	A	Q	S	A	N	D	E	Q	P
Query Conservation																								.															.
Alig confidence																								.															.
Template Conservation
Template Sequence		L	S	N	L	D	A	N	L	R	M	I	M	R	A	E	I	K	H	L	Q	Q	E	L	G	I	T	S	V	Y	V	T	H	D	Q	A	E	A	M	T	M	A	S	R	I	A	V	F	N	Q	G	K	L	V	Q	Y	G	T	P	D	E	V	Y	D	S	P	K	N	M	F	V	A
Template Known Secondary structure		T	T	T	S																												S										S							T	T														S		S	B
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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