Job Description P0A9U1 Confidence 98.90% Date Thu Jan 5 11:11:22 GMT 2012 Rank 84 Aligned Residues 162 % Identity 10% Template c2dr3A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0273 protein ph0284; PDBTitle: crystal structure of reca superfamily atpase ph0284 from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	G	E	I	F	G	L	L	G	P	N	G	A	G	K	S	T	T	F	K	M	M	C	G	L	L	V	P	T	S	G	Q	A	L	V	L	G	M	D	L	K	E	S	S	G	K	A	R	Q	H	L	G	Y	M	A	Q	K	F	S	L	Y	G	N	L	T	V	E	Q	N	L	R	F	F	S	G	V	Y	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	E	R	N	V	V	L	L	S	G	G	P	G	T	G	K	T	I	F	S	Q	Q	F	L	W	N	G	L	K	M	G	E	P	G	I	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	E	E	H	P	V	Q	V	R	Q	N	M	A	Q	F	G	W
Template Known Secondary structure				T	T									T	T	S	S															T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S											T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																									.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.					.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.				490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure															.	.	.	.																																														.	.	.
Query SS confidence															.	.	.	.																																														.	.	.
Query Sequence		L	R	G	R	A	Q	N	E	K	I	S	R	M	.	.	.	.	S	E	A	F	G	L	K	S	I	A	S	H	A	T	D	E	L	P	L	G	F	K	Q	R	L	A	L	A	C	S	L	M	H	E	P	D	I	L	F	L	D	E	P	T	S	.	.	.	G	V	D	P	L	T	R	R	E	F	W	L	H	I	N
Query Conservation															.	.	.	.																																														.	.	.
Alig confidence															.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		D	V	K	P	Y	E	E	K	G	M	F	A	M	V	D	A	F	T	A	G	I	G	K	E	Y	E	K	Y	I	V	H	D	L	T	D	I	R	E	F	I	E	V	L	R	Q	A	I	R	D	I	N	A	K	R	V	V	V	D	S	V	T	T	L	Y	I	N	K	P	A	M	A	R	S	I	I	L	Q	L	K	R
Template Known Secondary structure										T	S							S	T	T	T	T						S		B		S			S	S																T								T	S	G	G	G	T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.					.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		S	M	V	E	K	G	V	T	V	M	V	T	T	H	.	.	.	.	F	M	D	E	A	E	Y	C	D	R	I	G	L	V	Y	R	G	K	L
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		V	L	A	G	T	G	C	T	S	I	F	V	S	Q	V	S	G	F	G	P	G	V	E	H	G	V	D	G	I	I	R	L	D	L	D	E	I
Template Known Secondary structure						T	T																				S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions