Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9U1
Confidence97.51%DateThu Jan 5 11:11:22 GMT 2012
Rank132Aligned Residues129
% Identity21%Templatec2cvhB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  IHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRS
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Template Sequence  FAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEGG. . . . . . . . . . . . . . . . . . . . . . . . . . FSPERLVQMAETRG
Template Known Secondary structure  B
TTS
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TT
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   17..20.........30.........40.........50...... ...60.........70
 
   110.........120.........130.........140.........150.........160......... 170.........180.
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Query Sequence  VTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGV. . . . . . . . DPISRRELWQMV
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Template Sequence  LNPEEALSRF. . . . . . . . . . . . ILFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSITAHYRAEENRSGLIAELSRQLQVL
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   71........80 .........90.........100.........110.........120.........130........
 
   182..... ..190......
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Query Sequence  HELAGE. GMLILWSTS
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Template Sequence  LWIARKHNIPVIVINQ
Template Known Secondary structure  T


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   139140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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