Job Description P0A9U1 Confidence 97.51% Date Thu Jan 5 11:11:22 GMT 2012 Rank 132 Aligned Residues 129 % Identity 21% Template c2cvhB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase Resolution 2.20 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	A	G	Y	V	T	G	L	V	G	P	D	G	A	G	K	T	T	L	M	R	M	L	A	G	L	L	K	P	D	S	G	S	A	T	V	I	G	F	D	P	I	K	N	D	G	A	L	H	A	V	L	G	Y	M	P	Q	K	F	G	L	Y	E	D	L	T	V	M	E	N	L	N	L	Y	A	D	L	R	S
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	L	L	S	G	K	K	V	A	Y	V	D	T	E	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	P	E	R	L	V	Q	M	A	E	T	R	G
Template Known Secondary structure		B		T	T	S							S	T	T	S	S														S							S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																											.	.	.	60	.	.	.	.	.	.	.	.	.	70
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.
Query Sequence		V	T	G	E	A	R	K	Q	T	F	A	R	L	L	E	F	T	S	L	G	P	F	T	G	R	L	A	G	K	L	S	G	G	M	K	Q	K	L	G	L	A	C	T	L	V	G	E	P	K	V	L	L	L	D	E	P	G	V	G	V	.	.	.	.	.	.	.	.	D	P	I	S	R	R	E	L	W	Q	M	V
Query Conservation																																																														.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	P	E	E	A	L	S	R	F	.	.	.	.	.	.	.	.	.	.	.	.	I	L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	S	N	F	A	L	V	V	V	D	S	I	T	A	H	Y	R	A	E	E	N	R	S	G	L	I	A	E	L	S	R	Q	L	Q	V	L
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.							S	S																T	T										S		S	B	T	T	B
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80													.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		182	.	.	.	.	.		.	.	190	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		H	E	L	A	G	E	.	G	M	L	I	L	W	S	T	S
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		L	W	I	A	R	K	H	N	I	P	V	I	V	I	N	Q
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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