Job Description P23917 Confidence 99.85% Date Thu Jan 5 11:40:37 GMT 2012 Rank 39 Aligned Residues 173 % Identity 16% Template d2ch5a1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like Resolution 1.9

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	V	F	A	V	I	I	G	T	G	C	G	A	G	V	A	F	N	G	R	A	H	I	G	G	N	G	T	A	G	E	W	G	H	N	P	L	P	W	M	D	E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	C	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		D	G	G	V	V	L	I	S	G	T	G	S	.	.	.	.	N	C	R	L	I	N	P	D	G	S	E	S	G	C	G	G	W	G	H	M	M	G	D	E	G	S	A	Y	W	I	A	H	Q	A	V	K	I	V	F	D	S	I	D	N	L	E	A	A	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q
Template Known Secondary structure										S	S	S		.	.	.	.							T	T	S										T	T	T			T	T	S																		T	S	S			S	S														T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		203	.																				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.									.	.	.	250	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Query Sequence		H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	S	E	I	I	R	L	V	E	E	S	D	P	V	A	E	L	A	L	R	R	Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D	P	D	.	.	.	.	.	.	.	.	V	I	V	L	G	G	G	M	S
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G	F	C	R	K	I	A	E	G	A	Q	Q	G	D	P	L	S	R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W
Template Known Secondary structure			S	S						T	T	T	T	T	T								T	T										T	T																							G	G	G	S		G	G	G	G		S	T	T								S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		256		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure			.																							.
Query SS confidence			.																							.
Query Sequence		N	.	V	D	R	L	Y	Q	T	V	G	Q	L	I	K	Q	F	V	F	G	G	E	C	E	.	T	P	V	R	K	A	K	H	G	D	S	S	G	V	R	G	A	A	W	L	W	P	Q	E
Query Conservation			.																							.
Alig confidence			.																							.								.	.	.
Template Conservation																																		.	.	.
Template Sequence		K	S	W	E	L	L	K	E	G	F	L	L	A	L	T	Q	G	R	A	Q	N	F	F	S	S	F	T	L	M	K	L	R	.	.	.	H	S	S	A	L	G	G	A	S	L	G	A	R	H
Template Known Secondary structure		G	G																				S		S								S	.	.	.	S		T											T
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions