Return to main results Retrieve Phyre Job Id

Job DescriptionP23917
Confidence97.97%DateThu Jan 5 11:40:37 GMT 2012
Rank99Aligned Residues170
% Identity22%Templated1v4sa2
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Hexokinase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150... ......160.........170.........180.. .......190......
Predicted Secondary structure 

















......





















...


Query SS confidence 



























. . . . . .




























. . .













Query Sequence  FAVIIGTGCGAGVAFNGRAHIGGNGTAG. . . . . . EWGHNPLPWMDEDELRYREEVPCYCGKQG. . . CIETFISGTGFAMD
Query Conservation    
  
 
 
   
  
    
    

......
 

                     
  
...  
   
       
Alig confidence 



























......




























...













Template Conservation 












 
    
 
       



 


 

         
  
  

  
 


 
 






 




Template Sequence  VGMIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGEL
Template Known Secondary structure  SSSGGG
TTSS

SS

GGGTTTTSTTTTT

TSSSTTS

TTT
Template Predicted Secondary structure 









































Template SS confidence 















































































   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   197..200 .........210......... 220.........230.
Predicted Secondary structure 
....................








.........................
Query SS confidence 



. . . . . . . . . . . . . . . . . . . .


















. . . . . . . . . . . . . . . . . . . . . . . . .











Query Sequence  YRRL. . . . . . . . . . . . . . . . . . . . SGHALKGSEIIRLVEESDP. . . . . . . . . . . . . . . . . . . . . . . . . VAELALRRYELR
Query Conservation      ....................                

 ......................... 
  
       
Alig confidence 



....................


















.........................











Template Conservation 

 

  
     

       
     
 
  

 
  
          
          
   

 
   
  


 
Template Sequence  VRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVSTRAAHM
Template Known Secondary structure  TT
SGGG


TGGGSTT
S
TT

SSSTT



Template Predicted Secondary structure 



























Template SS confidence 















































































   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   232.......240...... ...250...... ...260.........270.........280.........290.........300
Predicted Secondary structure 


........

.












Query SS confidence 














. . . . . . . .









.











































Query Sequence  LAKSLAHVVNILDPD. . . . . . . . VIVLGGGMSN. VDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWP
Query Conservation 

  
  
   
 
 ........ 


 
 
  .           
            
  
         


 
  
Alig confidence 














........









.
























.....













Template Conservation   

 



              
 
  


     
 
   
   
  
     
 
  .....  



 



 

Template Sequence  CSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCEITFIE. . . . . SEEGSGRGAALVSA
Template Known Secondary structure  TT

SSS
STT
TT.....
SS
Template Predicted Secondary structure 















.....



Template SS confidence 













































































   382.......390.........400.........410.........420.........430.........440 .........450....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions