Job Description P23917 Confidence 98.72% Date Thu Jan 5 11:40:37 GMT 2012 Rank 68 Aligned Residues 253 % Identity 18% Template c3p4iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetate kinase; PDBTitle: crystal structure of acetate kinase from mycobacterium avium Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.
Predicted Secondary structure																														.	.	.	.	.																																					.	.	.	.
Query SS confidence																														.	.	.	.	.																																					.	.	.	.
Query Sequence		R	I	G	I	D	L	G	G	T	K	T	E	V	I	A	L	G	D	A	G	E	Q	L	Y	R	H	R	L	.	.	.	.	.	P	T	P	R	D	D	Y	R	Q	T	I	E	T	I	A	T	L	V	D	M	A	E	Q	A	T	G	Q	R	G	T	V	G	M	G	I	P	.	.	.	.	G	S	I	S	P	Y	T
Query Conservation																														.	.	.	.	.																																					.	.	.	.
Alig confidence																														.	.	.	.	.																																					.	.	.	.
Template Conservation
Template Sequence		V	L	V	I	N	S	G	S	S	S	L	K	F	Q	L	V	D	P	E	S	G	V	A	A	S	T	G	I	V	E	R	I	E	S	S	P	V	P	D	H	D	A	A	L	R	R	A	F	D	M	L	A	G	D	G	V	D	L	N	T	A	G	L	V	A	V	G	H	R	V	V	H	G	G	N	T	F	Y	R	P
Template Known Secondary structure									S	S									T	T	T																S			S															T	T			T	T	T	T	T									S			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		73	.	.	.	.	.	.	80	.	.	.	.	.	.														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																																		.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	V	K	N	A	N	S	T	W	L	N	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	D	K	D	L	S	A	R	L	Q	R	E	V	R	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	L	D	D	A	V	I	A	R	L	H	E	L	S	E	L	A	P	L	H	N	P	P	A	L	L	G	I	E	V	A	R	R	L	L	P	G	I	A	H	V	A	V	F	D	T	G	F	F	H	D	L	P	P	A	A	A	T	Y	A	I	D	R	E	L	A	D	R	W	Q	I	R	R	Y	G	F	H	G	T
Template Known Secondary structure													G	G	G	T	T	T		T	T	T																T	T	S							T	T	G	G	G	T	T									S	S									T		S				S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		107	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure											.	.	.																																																																				.
Query SS confidence											.	.	.																																																																				.
Query Sequence		N	C	L	A	V	S	E	A	V	.	.	.	D	G	A	A	A	G	A	Q	T	V	F	A	V	I	I	G	T	G	C	G	A	G	V	A	F	N	G	R	A	H	I	G	G	N	G	T	A	G	E	W	G	H	N	P	L	P	W	M	D	E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	.
Query Conservation											.	.	.																																																																				.
Alig confidence											.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	H	R	Y	V	S	E	Q	A	A	A	F	L	D	R	P	L	R	G	L	K	Q	I	V	L	H	L	G	N	G	C	S	A	S	A	I	A	G	T	R	P	L	D	T	S	M	G	L	T	P	L	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	M	G	T	R	S	G	D	I	D	P
Template Known Secondary structure															T	S		G	G	G									S	S	S								T	T						S			S	S	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S				S			T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																.	.	.	.	230	.	.	.	.	.	.	.
								183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.	.																																											.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.	.																																											.
Query Sequence		.	.	.	.	.	.	C	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G	.	.	.	.	.	H	A	L	K	G	S	E	I	I	R	L	V	E	E	S	D	P	V	A	E	L	A	L	R	R	Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D	.	P	D	V	I	V	L
Query Conservation		.	.	.	.	.	.																					.	.	.	.	.																																											.
Alig confidence		.	.	.	.	.	.																					.	.	.	.	.																																											.
Template Conservation
Template Sequence		S	V	V	S	Y	L	C	H	T	A	G	M	G	V	D	D	V	E	S	M	L	N	H	R	S	G	V	V	G	L	S	G	V	R	D	F	R	R	L	R	E	L	I	E	S	G	D	G	A	A	Q	L	A	Y	S	V	F	T	H	R	L	R	K	Y	I	G	A	Y	L	A	V	L	G	H	T	D	V	I	S	F
Template Known Secondary structure																									S								S				T									T	T																											S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		251	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	G	G	M	S	.	N	V	D	R	L	Y	Q	T	V	G	Q	L	I	K
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		T	A	G	I	G	E	N	D	A	A	V	R	R	D	A	V	S	G	M	E
Template Known Secondary structure							T	T										T	T		G
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions