Job Description P23917 Confidence 40.47% Date Thu Jan 5 11:40:37 GMT 2012 Rank 182 Aligned Residues 78 % Identity 10% Template c3mcaB_ PDB info PDB header:translation regulation/hydrolase Chain: B: PDB Molecule:protein dom34; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		E	E	S	D	P	V	A	E	L	A	L	R	R	Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D	P	D	V	I	V	L	G	G	G	M	S	N	V	D	R	L	Y	Q	T	V	G	Q	L	I	K	.	.	.	.	Q	F	V	F	G	G	E	C	E	T	P	V	R	K	A	K	H	G	D	S	S
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		R	G	D	S	S	A	Y	Q	K	G	L	D	K	F	Y	D	S	V	F	Q	S	I	N	S	E	F	D	F	D	K	L	K	V	V	I	L	A	S	P	G	F	V	A	R	G	L	Y	D	Y	I	F	S	M	A	V	K	L	D	L	K	Q	I	V	K	S	K	N	K	F	V	I	L	H	S	S	T	G	H	I	H
Template Known Secondary structure		T	T	B																									T	T	T		S							S	S	S																T	T								G	G	G							S		S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		291	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		252	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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