Job Description P23917 Confidence 98.18% Date Thu Jan 5 11:40:37 GMT 2012 Rank 86 Aligned Residues 266 % Identity 14% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.																															.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	G	I	D	L	G	G	T	K	T	E	V	I	A	L	G	D	A	G	.	E	Q	L	Y	R	H	R	L	P	T	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	R	Q	T	I	E	T	I	A	T	L	V	D	M	A
Query Conservation																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	F	P	T	V	I	A	T	R	T	E	D	L	D	F	F	I	G	N	D	A	L	K	K	A	S	A	G	Y	S	L	D	Y	P	I	R	H	G	Q	I	E	N	W	D	H	M	E	R	F	W	Q	Q	S	L	F	K	Y
Template Known Secondary structure									S	S							T	T	S	S	S		S													S	S					T						T										S			T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																			.																									.
Query SS confidence																																																			.																									.
Query Sequence		E	Q	A	T	G	Q	R	G	T	V	G	M	G	I	P	G	S	I	S	P	Y	T	G	V	V	K	N	A	N	S	T	W	L	N	G	Q	P	F	D	K	D	L	S	A	R	L	Q	R	E	.	V	R	L	A	N	D	A	N	C	L	A	V	S	E	A	V	D	G	A	A	A	G	A	Q	.	T	V	F	A	V
Query Conservation																																																			.																									.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.														.																									.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	C	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	N	R	E	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S	K	V	T	D	R	S	L	T	G	T	V	V
Template Known Secondary structure		S				G	G	G									T	T								.	.	.	.	.	.	.	.	.	.	.	.									T	T			S														G	G	G	G	S	T	T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	T	G	C	G	A	G	V	A	F	N	G	R	A	H	I	G	G	N	G	T	A	G	E	W	G	H	N	P	L	P	W	M	D	E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	C	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G	H	A	L	K	G	S
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	G	D	G	V	T	H	I	I	P	V	A	E	G	Y	V	I	G	S	S	I	K	T	M	P	L	A	G	R	D	V	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	Q	S	L	L	R	L	K	T	A	E	R	I	K	E	E	C	C	Y	V	C	P	D	I	V
Template Known Secondary structure				S	S	S									T	T				G	G	G					S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T																	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		E	I	I	R	L	V	E	E	S	D	P	V	A	E	L	A	L	R	R	Y	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	A	K	S	L	A	H	V	V	N	I	L	D	P	D	.	.	.	.	.	.	.	V	I	V	L	G	G	G	M	S	N	V	D	R	L	Y	Q	T	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	F	S	R	F	D	R	L	K	Y	A	S	I	D	V	G	F	E	R	F	L	A	P	E	I	F	F	N	P	E	I	A	S	S	D	F	L	T	P	L	P	E	L	V	D	N	V	V	Q	S	S	P	I	D	V	R	K	G	L	Y	K	N	I	V	L	S	G	G	S	T	L	F	K	N	F	G	N	R	L
Template Known Secondary structure							T	T				B				B			T					S	G	G	G	G	T		G	G	G	T		S	S			S												T	S																S	G	G	G		S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	I	K	Q	F	V	F	G	G	E	C	E	T	P	V	R	K	A	K	H	G	D	S	S	G	V	R	G	A	A	W	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	D	L	K	R	I	V	D	E	R	G	V	D	V	N	V	I	S	H	K	R	Q	R	N	A	V	W	F	G	G	S	L	L	A
Template Known Secondary structure										T	T											T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions