Job Description P23917 Confidence 98.16% Date Thu Jan 5 11:40:37 GMT 2012 Rank 88 Aligned Residues 300 % Identity 15% Template c2iirJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:acetate kinase; PDBTitle: acetate kinase from a hypothermophile thermotoga maritima Resolution 3.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		R	I	G	I	D	L	G	G	T	K	T	E	V	I	A	L	G	D	A	G	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	H	R	L	P	T	P	R	D	D	Y	R	Q	T	I	E	T	I	A	T	L	V	D	M	A	E	Q	.	.	.	.	A	T	G
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		V	L	V	I	N	S	G	S	S	S	I	K	Y	Q	L	I	E	M	E	G	E	K	V	L	C	K	G	I	A	E	R	I	G	I	E	G	S	R	L	V	H	R	V	G	D	E	K	H	V	I	E	R	E	L	P	D	H	E	E	A	L	K	L	I	L	N	T	L	V	D	E	K	L	G	V	I	K	D	L	K
Template Known Secondary structure									T	T									T	T	T	T											T	T	S	T	T								T	T											S															T	T	T		S		S		S	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.												.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	G	T	V	G	M	G	I	P	G	S	I	S	P	Y	T	G	V	V	K	N	A	.	.	.	.	.	.	.	.	.	.	.	N	S	T	W	L	N	G	Q	P	.	.	.	.	F	D	K	D	L	S	A	R	L	Q	R	E	V	R	L	A	N	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	D	A	V	G	H	R	V	V	H	G	G	E	R	F	K	E	S	V	L	V	D	E	E	V	L	K	A	I	E	E	V	S	P	L	A	P	L	H	N	P	A	N	L	M	G	I	K	A	A	M	K	L	L	P	G	V	P	N	V	A	V	F	D	T	A	F	H	Q	T	I	P	Q	K	A	Y	L	Y	A
Template Known Secondary structure		T									S			T	T	T		S	S																G	G	G	S	T	T	T															S	T	T								T	T	G	G	G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																								107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	L	A	V	S	E	A	V	D	G	A	A	A	G	A	Q	T	V	F	A	V	I	I	G	T	G	C	G	A	G	V	A	F	N	G	R	A	H	I	G	G	N	G	T	A	G	E	W	G	H	N	P	L	P	W	M	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																																																																										.
Template Sequence		I	P	Y	E	Y	Y	E	K	Y	K	I	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	K	R	A	A	E	I	L	G	K	K	L	E	E	L	K	I	I	T	C	H	I	G	N	G	A	S	V	A	A	V	K	Y	G	K	C	V	D	T	S	M	G	F	T	P	L	E	G	.	L	V	M	G	T	R	S
Template Known Secondary structure		S		T									S				S																T	T	S		G	G	G									S	S	S								T	T						S			S	S	T	T	S	S	.	S			S	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	C	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G	H	A	L	K	G	S	E	I	I	R	L	V	E	E	S	D	P	V	A	E	L	A	L	R	R	Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	L	D	P	A	I	P	F	F	I	M	E	K	E	G	I	S	P	Q	E	M	Y	D	I	L	N	K	K	S	G	V	Y	G	L	S	K	G	F	S	S	D	M	R	D	I	E	E	A	A	L	K	G	D	E	W	C	K	L	V	L	E	I	Y	D	Y	R	I	A	K	Y	I	G	A	Y	A	A	A	M	N
Template Known Secondary structure			S			T	T										T													S							T	T	T	S		S											T	T																											T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
			245	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure		.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	P	D	V	I	V	L	G	G	G	M	S	N	.	V	D	R	L	Y	Q	T	V	G	Q	L	I	K	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	G	E	C	E	T	P	V	R	K	A	K	H	G	D	S	S	G	V	R	G	A	A	W	L	W	P	Q	E
Query Conservation		.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	D	A	I	V	F	T	A	G	V	G	E	N	S	P	I	T	R	E	D	V	C	S	Y	L	E	F	L	G	V	K	L	D	K	Q	K	N	E	E	T	I	R	G	K	E	G	I	I	S	T	P	D	S	R	V	K	V	L	V	V	P	T	N	E	E	L	M	I	A	R	D	T	K	E	I	V	E	K
Template Known Secondary structure				S										T	T											T	T	G	G	G	T			B								S		T	T						B		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions