Job Description P23917 Confidence 61.10% Date Thu Jan 5 11:40:37 GMT 2012 Rank 170 Aligned Residues 195 % Identity 19% Template c2f9tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pantothenate kinase; PDBTitle: structure of the type iii coaa from pseudomonas aeruginosa Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	I	D	L	G	G	T	K	T	E	V	I	A	L	G	D	A	G	E	Q	L	Y	R	H	R	L	P	T	P	R	D	D	Y	R	Q	T	I	E	T	I	A	T	L	V	D	M	A	E	Q	A	T	G	Q	R	G	T	V	G	M	G	I	P	G	S	I	S	P	Y	T	G	V	V	K	N	A	N	S	T
Query Conservation
Alig confidence																		.																					.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																		.																					.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	L	D	C	G	N	S	L	I	K	W	R	V	I	.	E	G	A	A	R	S	V	A	G	G	L	A	E	S	D	D	A	L	V	E	.	.	.	.	.	.	.	.	.	Q	L	T	S	Q	Q	A	L	P	V	R	A	C	R	L	V	S	V	R	S	E	Q	E	T	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S								.		T	T	T									S	S	S					T	.	.	.	.	.	.	.	.	.	T	T	T	S	S														S							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																					.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	N	G	Q	P	F	D	K	D	L	S	A	R	L	Q	R	E	V	R	L	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	N	C	L	A	V	S	E	A	V	D	G	A	A	A	G	A	Q	T	V	F	A	V	I	I	G	T	G	C	G	A	G	V	A	F	N
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation		.	.	.	.	.																																																				.	.	.	.
Template Sequence		.	.	.	.	.	Q	L	V	A	R	L	E	Q	L	F	P	V	S	A	L	V	A	S	S	G	K	Q	L	A	G	V	R	N	G	Y	L	D	Y	Q	R	L	G	L	D	R	W	L	A	L	V	A	A	H	H	L	A	.	.	.	.	K	K	A	C	L	V	I	D	L	G	T	A	V	T	S	D	L	V	A	A
Template Known Secondary structure		.	.	.	.	.								T	T	S	S										S			T	T					S	S	S	G	G	G	S																.	.	.	.	S	S								S	S									T
Template Predicted Secondary structure		.	.	.	.	.																																																				.	.	.	.
Template SS confidence
							63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	H	I	G	G	N	G	T	A	G	E	W	G	H	N	P	L	P	W	M	D	E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	C	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G	H	A	L	K	G	S	E	I	I	R	L	V	E	E	S	D	P	V	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	V	H	L	G	G	Y	I	C	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	T	L	X	R	S	Q	L	R	T	H	T	R	R	I	R	Y	D	D	A	E	A	R	R	A	L	A	S	L	Q	P	G	Q	A	T	A
Template Known Secondary structure		T	S	B										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T												T	T			S			S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.																																	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		E	L	A	L	R	R	Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D	P	D	.	.	.	.	.	V	I	V	L	G	G	G	M	S	N
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		E	A	V	E	R	G	C	L	L	X	L	R	G	F	V	R	E	Q	Y	A	X	A	C	E	L	L	G	P	D	C	E	I	F	L	T	G	G	D	A	E
Template Known Secondary structure																											T		T	T							S	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions