Job Description P23917 Confidence 100.00% Date Thu Jan 5 11:40:37 GMT 2012 Rank 24 Aligned Residues 266 % Identity 16% Template c1zc6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable n-acetylglucosamine kinase; PDBTitle: crystal structure of putative n-acetylglucosamine kinase from2 chromobacterium violaceum. northeast structural genomics target3 cvr23. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																		.	.																				.	.	.	.	.	.
Query SS confidence																																		.	.																				.	.	.	.	.	.
Query Sequence		R	I	G	I	D	L	G	G	T	K	T	E	V	I	A	L	G	D	A	G	E	Q	L	Y	R	H	R	L	P	T	P	R	.	.	D	D	Y	R	Q	T	I	E	T	I	A	T	L	V	D	M	A	E	Q	.	.	.	.	.	.	A	T	G	Q	R	G	T	V	G	M	G	I	P	G	S	I	S	P	Y	T	G
Query Conservation																																		.	.																				.	.	.	.	.	.
Alig confidence																																		.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	G	V	D	G	G	G	T	G	T	R	I	R	L	H	A	S	D	G	T	P	L	A	X	A	E	G	G	A	S	A	L	S	Q	G	I	A	K	S	W	Q	A	V	L	S	T	L	E	A	A	F	Q	Q	A	G	L	P	A	A	P	A	S	A	C	A	I	G	L	G	L	S	G	V	H	N	R	Q	W	A
Template Known Secondary structure									S	S									T	T										S				G	G	G																				T	T						G	G	G								S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		V	V	K	N	A	N	S	T	W	L	N	G	Q	P	F	D	K	D	L	S	A	R	L	Q	R	E	V	R	L	A	N	D	A	N	C	L	A	V	S	E	A	V	D	G	A	A	.	.	.	A	G	A	Q	T	V	F	A	V	I	I	G	T	G	C	G	A	G	V	A	F	N	G	R	A	H	I	G	G	N	G
Query Conservation																																																.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	F	E	S	Q	A	P	G	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	S	L	A	T	D	G	Y	T	T	L	L	G	A	H	G	G	Q	P	G	I	I	V	A	L	G	T	G	S	I	G	E	A	L	Y	P	D	G	S	H	R	E	A	G	G	W	G	Y	P	S	G	D	E	A
Template Known Secondary structure							T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	T	S	S							S	S	S								T	T	S						S				T	T	T	S		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.															.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		T	A	G	E	W	G	H	N	P	L	P	W	M	D	E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	C	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G	.	.	.	H	A	L	K	G	S	E	I	I	R	L	V	E	E	S	D	P	V	A	E	L	A	L	R	R
Query Conservation																																																						.	.	.
Alig confidence																		.	.	.	.																																	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		S	G	A	W	L	G	Q	R	A	A	Q	L	T	Q	X	A	.	.	.	.	L	D	G	R	H	S	H	S	P	L	T	R	A	V	L	D	F	V	G	G	D	W	Q	A	X	X	A	W	N	G	R	A	T	P	A	Q	F	A	R	L	A	P	L	V	L	S	A	A	R	V	D	P	E	A	D	A	L	L	R	Q
Template Known Secondary structure		S																.	.	.	.			T	S	S														T	S	S										T								T	T								T	T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D	P	D	V	I	V	L	G	G	G	M	S	N	V	D	R	L	Y	Q	T	V	G	Q	L	I	K	Q	F	V	F	G	G	E	C	E	T	P	V	R	K	A	K	H	G	D	S	S	G	V	R	G	A	A	W	L	W	P
Query Conservation
Alig confidence											.																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	E	D	A	W	A	I	A	.	R	A	L	D	P	Q	D	E	L	P	V	A	L	C	G	G	L	G	.	.	Q	A	L	R	D	W	L	P	P	G	F	R	Q	R	L	V	A	P	Q	G	D	.	.	.	.	.	.	.	.	.	.	.	.	S	A	Q	G	A	L	L	L	L	Q
Template Known Secondary structure											.					T	T			S						S				.	.			T	G	G	G	S												S	S		.	.	.	.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure											.																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.													.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions