Job Description P23917 Confidence 99.81% Date Thu Jan 5 11:40:37 GMT 2012 Rank 40 Aligned Residues 255 % Identity 13% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.																						.
Query SS confidence																																				.	.																						.
Query Sequence		M	R	I	G	I	D	L	G	G	T	K	T	E	V	I	A	L	G	D	A	G	E	Q	L	Y	R	H	R	L	P	T	P	R	D	.	.	D	Y	R	Q	T	I	E	T	I	A	T	L	V	D	M	A	E	Q	A	T	G	.	Q	R	G	T	V	G	M	G	I	P	G	S	I	S	P	Y	T	G	V	V	K	N
Query Conservation																																				.	.																						.
Alig confidence																																				.	.																						.																				.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		X	I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	S	S	I	R	A	V	Y	F	Y	G	A	G	C	T	P	A	K	A	P	X	.	.	.
Template Known Secondary structure										S	S									T	T													T	T	T	S										T	T	T	T					T	T	S	T	T	T									T	T			T	T	T				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		A	N	S	T	W	L	N	G	Q	P	F	D	K	D	L	S	A	R	L	Q	.	.	R	E	V	R	L	A	N	D	A	N	C	L	A	V	S	E	A	V	D	G	A	A	A	G	A	Q	T	V	F	A	V	I	I	G	T	G	C	G	A	G	V	A	F	N	G	R	A	H	I	G	G	N	G	T	A	G	E	W
Query Conservation																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.											.	.																.	.	.	.	.	.																									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.																									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	.	.	.	.	.	.	L	C	G	D	S	E	G	I	A	C	I	L	G	T	G	S	N	S	C	L	F	D	G	R	.	.	.	.	E	I	K	A	N	V	S	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.									S	T	T		S															.	.	.	.	.	.		T	T	T	S								S	S	S								S	S	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.																									.	.	.	.
Template SS confidence
												78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.																																.	.	.	.	.
Query SS confidence																														.	.	.	.	.																																.	.	.	.	.
Query Sequence		G	H	N	P	L	P	W	M	D	E	D	E	L	R	Y	R	E	E	V	P	C	Y	C	G	K	Q	G	C	.	.	.	.	.	I	E	T	F	I	S	G	T	G	F	A	M	D	Y	R	R	L	S	G	H	A	L	K	G	S	E	I	I	R	L	V	.	.	.	.	.	E	E	S	D	P	V	A	E	L	A	L
Query Conservation																														.	.	.	.	.																																.	.	.	.	.
Alig confidence																														.	.	.	.	.								.																								.	.	.	.	.
Template Conservation																																										.
Template Sequence		G	Y	I	L	G	D	E	G	S	G	A	V	L	G	R	L	F	I	G	S	L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	.	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	F	L	A	G	F	S	P	F	I	A	Q	H	L	D	I	P	A	V	Y	S	L	V
Template Known Secondary structure								T	T	S														T	T		S		T	T									T	T		.												S	S								T	T						T	T	T	T	S
Template Predicted Secondary structure																																										.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	E	L	R	L	A	K	S	L	A	H	V	V	N	I	L	D	P	D	V	I	V	L	G	G	G	M	S	N	V	D	R	L	Y	Q	T	V	G	Q	L	I	K	Q	F	V	F	G	G	E	C	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	S	F	D	D	F	L	V	R	N	V	L	R	Y	N	R	P	D	L	P	L	H	F	I	G	S	V	A	F	H	Y	R	E	V	L	S	S	V	I	K	K	R	G	L	T	L	G	S	V	L	Q	S	P
Template Known Secondary structure													T	G	G	G			T	T	S						S						T											T	T								S		S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions