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Job DescriptionP46891
Confidence98.72%DateThu Jan 5 12:04:39 GMT 2012
Rank81Aligned Residues115
% Identity27%Templatec3d6jA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 from bacteroides fragilis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........
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Query Sequence  ARLAAFDMDGTLLMPDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDXIKRTIGKTLEESFSILTGITDADQLESFRQEYSKEADIYXN
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BTTT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   1920.........30.........40.........50.........60.........70.........80.........90.....
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Query Sequence  . . . HLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQ
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Template Sequence  ANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHXPDDWFDIIIGG. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GG

TTT

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   83......90.........100.........110.........120.........130.....
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  WDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFS
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   176...180.........190.........200.........210.........220........
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Query Sequence  ATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFI
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Template Sequence  . . . . . EDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFT
Template Known Secondary structure  .....GG
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   136...140.........150.........160.........170.........180...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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