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Job DescriptionP46891
Confidence98.85%DateThu Jan 5 12:04:39 GMT 2012
Rank73Aligned Residues171
% Identity15%Templatec3b8eC_
PDB info PDB header:hydrolase/transport proteinChain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  HHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWD
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Template Sequence  DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   586...590.........600.........610.........620.........630
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  TRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSAT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . NETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKY. . . . . . . HT
Template Known Secondary structure  ........................BTTSSSSSSTTTTTTTT

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   631........640.........650.........660.........670....... ..
 
   178.180.........190.........200.........210.........220.........230 .........240.........250......
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Query Sequence  DCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMG. NAMPQLRAELPHLPVIGHCRNQAVSH
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Template Sequence  EIVFARTSPQQKLIIVEGCQRQGAI. . . . VAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAADMI. . LLDDNFASIVT
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SGGGTTSS

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   680.........690.........700.... .....710.........720.........730.........740.. .......750...
 
   257..260
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Query Sequence  YLTH
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Template Sequence  GVEE
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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