Job Description P46891 Confidence 99.00% Date Thu Jan 5 12:04:39 GMT 2012 Rank 65 Aligned Residues 152 % Identity 22% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	P	D	H	H	L	G	E	K	T	L	S	T	L	A	R	L	R	E	R	D	I	T	L	T	F	A	T	G	R	H	A	L	E	M	Q	H	I	L	G	A	L	S	L	D	A	Y	L	I	T	G	N	G	T	R	V	H	S	L	E	G	E	L	L	H	R	D	D	L	P	A	D	V	A	E	L	V	L
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		I	M	P	C	M	D	P	P	R	H	D	T	Y	K	T	V	C	E	A	K	T	L	G	L	S	I	K	M	L	T	G	D	A	V	G	I	A	R	E	T	S	R	Q	L	G	L	G	T	N	.	.	.	.	.	.	.	.	.	.	I	Y	N	A	E	R	L	G	L	G	G	G	G	D	M	P	G	S	E	V	Y
Template Known Secondary structure		B																						T								S	S													T	S	S		S	.	.	.	.	.	.	.	.	.	.				S	S	S	S	S	S		B				G	G	G	G	G	G	G
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.											.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Q	W	D	T	R	A	S	M	H	I	F	N	D	D	G	W	F	T	G	K	E	I	P	A	L	L	Q	A	F	V	Y	S	G	F	R	Y	Q	I	I	D	V	K	K	M	P	L	G	S	V	T	K	I	C	F	C	G	D	H	D	D	L	T	R	L	Q	I	Q	L	Y	E	A	L	G	E	R	A	H	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	V	E	A	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		599	600	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	S	A	T	D	C	L	E	V	L	P	V	G	C	N	K	G	A	A	L	T	V	L	T	Q	H	L	G	L	S	L	R	D	C	M	A	F	G	D	A	M	N	D	R	E	M	L	V	S	V	G	S	G	F	I	M	G	N	A	M	P	Q	L	R	A	E	L	P	H	L	P	V	I	G	H	C	R	N	Q
Query Conservation
Alig confidence		.	.	.	.	.									.	.																.	.	.	.																																							.	.
Template Conservation		.	.	.	.	.									.	.																.	.	.	.																																							.	.
Template Sequence		.	.	.	.	.	G	F	A	E	V	F	P	Q	.	.	H	K	Y	N	V	V	E	I	L	Q	Q	R	G	Y	L	.	.	.	.	V	A	M	T	G	D	G	V	N	D	A	P	S	L	K	K	A	D	T	G	I	A	V	E	G	S	S	D	A	A	R	S	A	A	D	I	V	F	.	.	L	A	P	G	L	G
Template Known Secondary structure		.	.	.	.	.				S			S	T	.	.											T	T	T			.	.	.	.								G	G	G							S	S						T	T	S							S	S	S				.	.	S	S			S
Template Predicted Secondary structure		.	.	.	.	.									.	.																.	.	.	.																																							.	.
Template SS confidence
							606	.	.	.	610	.	.	.			.	.	.	.	.	.	620	.	.	.	.	.	.	.	.					.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.			.	.	.	670	.	.
		253	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	H	Y	L	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	I	D	A	L	K	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		673	.	.	.	.	.	.	680

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions