Return to main results Retrieve Phyre Job Id

Job DescriptionP19318
Confidence99.90%DateThu Jan 5 11:37:15 GMT 2012
Rank12Aligned Residues195
% Identity13%Templated3c8ya1
SCOP infoFe-only hydrogenase Fe-only hydrogenase Fe-only hydrogenase
Resolution1.39

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280........ .290.........300. ........310.........320.........330.........340.....
Predicted Secondary structure 



.


.........










Query SS confidence 












.












. . . . . . . . .











































Query Sequence  ADRIEEAASTERE. VDLYERQCEVFLD. . . . . . . . . PHDPSVIEEALKQGIPQNVIDAAQRSPVYKMAMDWKLALPLHPE
Query Conservation               .             .........   
     
          
 
    
              
 
Alig confidence 












.












.........




































.





Template Conservation 
  
   
    
  
 



  



   

         

   

 


  
 

   

  
 
   
 .  
   
Template Sequence  MDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATEL. VQRIEN
Template Known Secondary structure 
TT

GGGGGTGGGGGT

SS


T
S.
Template Predicted Secondary structure 
















.
Template SS confidence 















































































   211........220.........230.........240.........250.........260.........270.........280... ......
 
   346...350.........360.........370.........380.........390...... ...400.........410.........420.
Predicted Secondary structure 

















....






Query SS confidence 


















































. . . .
























Query Sequence  YRTLPMVWYVPPLSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSA. . . . GDTGPVLRALKRMMAMRHYMRSQTV
Query Conservation             
                  
   

    
    
 
  
....              
 
   
    
Alig confidence 











..




































....


















..



Template Conservation      
 


 

..


 



  




 

 




 
 
 
 
        
    
  
 



 


 
..
 
 
Template Sequence  NGPFPMFTSCCP. . GWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFE. . ADRP
Template Known Secondary structure  T
S





..
GGGGGGB

B

TTTT


GGGS
S..T
T
Template Predicted Secondary structure 






..


















..

Template SS confidence 















































































   290.........300. ........310.........320.........330.........340.........350.........360. ....
 
   422.......430.........440.........450.........460......... 470.........480...
Predicted Secondary structure 



















...











Query SS confidence 















































. . .













Query Sequence  EGVTDTRAIDEVGLSVAQVEEMYRYLAIANYEDRFVIPTSHREMAGDA. . . FAERNGCGFTFGDG
Query Conservation      
   
    

            
   
 
 
 
        
 ...              
Alig confidence 






















........
















...













Template Conservation 
       


 



 

  

........    
    
     
      
        


Template Sequence  QMEKDGLRDIDAVITTRELAKMI. . . . . . . . KDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGG
Template Known Secondary structure  TSTTS
S........TT

GGG






GGGT


TTTSTT
Template Predicted Secondary structure 









........























Template SS confidence 
































































   366...370.........380........ .390.........400.........410.........420..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions