Job Description P19318 Confidence 30.84% Date Thu Jan 5 11:37:15 GMT 2012 Rank 72 Aligned Residues 49 % Identity 24% Template c1m2oA_ PDB info PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		196	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.													.	.	.	.
Query SS confidence									.	.													.	.	.	.
Query Sequence		P	S	G	A	I	Y	K	.	.	R	E	E	D	G	I	V	L	I	D	Q	D	.	.	.	.	K	C	R	G	W	R	L	C	I	S	G	C	P	Y	K	K	I	Y	F	N	W	K	S	G	K	S	E	K	C	I	F	C	Y	P	R
Query Conservation									.	.													.	.	.	.
Alig confidence									.	.													.	.	.	.								.	.										.	.	.
Template Conservation																																		.	.										.	.	.
Template Sequence		P	V	G	C	L	Y	T	P	L	K	E	Y	D	E	L	N	V	A	P	Y	N	P	V	V	C	S	G	P	H	C	K	S	.	.	I	L	N	P	Y	C	V	I	D	.	.	.	P	R	N	S	S	W	S	C	P	I	C	N	S	R
Template Known Secondary structure			S						T	T				T	T						S				B			S	T	T	T			.	.	B			T	T	S				.	.	.	T	T	T	T					T	T	T
Template Predicted Secondary structure																																		.	.										.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions