Job Description P19318 Confidence 100.00% Date Thu Jan 5 11:37:15 GMT 2012 Rank 10 Aligned Residues 257 % Identity 16% Template c1hfeL_ PDB info PDB header:hydrogenase Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		E	E	D	G	I	V	L	I	D	Q	D	K	C	R	G	W	R	L	C	I	S	G	C	P	Y	K	K	I	Y	F	N	W	K	S	G	K	S	.	.	.	.	E	K	C	I	F	C	Y	P	R	I	E	S	G	Q	P	T	V	C	S	E	T	C	V	G	R	I	R	Y	L	G	V	L	L	Y	D	A	D	R	I
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.								.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.											.	.
Template Sequence		D	K	L	H	F	V	Q	I	D	E	A	K	C	I	G	C	D	T	C	S	Q	Y	C	P	T	A	A	I	F	G	E	M	G	E	P	H	S	I	P	H	I	E	A	C	I	N	C	G	.	.	.	.	.	.	.	.	.	Q	C	L	T	H	C	P	E	N	A	.	.	I	Y	E	A	Q	S	W	V	P	E	V
Template Known Secondary structure		G	G			S					T	T	T												T	T				B			T	T	S			B				G	G	G						.	.	.	.	.	.	.	.	.	T	T	G	G	G		T	T			.	.				S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.
		280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.										.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.
Predicted Secondary structure											.															.	.	.	.	.	.	.	.	.																																											.
Query SS confidence											.															.	.	.	.	.	.	.	.	.																																											.
Query Sequence		E	E	A	A	S	T	E	R	E	.	V	D	L	Y	E	R	Q	C	E	V	F	L	D	P	.	.	.	.	.	.	.	.	.	H	D	P	S	V	I	E	E	A	L	K	Q	G	I	P	Q	N	V	I	D	A	A	Q	R	S	P	V	Y	K	M	A	M	D	W	K	L	A	L	P	L	H	P	.	E	Y	R	T
Query Conservation											.															.	.	.	.	.	.	.	.	.																																											.
Alig confidence											.															.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		E	K	K	L	K	D	G	K	V	K	C	I	A	M	P	A	P	A	V	R	Y	A	L	G	D	A	F	G	M	P	V	G	S	V	T	T	G	K	M	L	A	A	L	Q	K	L	G	F	A	H	C	W	D	T	E	F	T	A	D	V	T	I	W	E	E	G	S	E	F	V	E	R	L	T	K	K	S	D	M	P
Template Known Secondary structure								T	T									G	G	G	G	G	T	G	G	G	G	G	T			T	T															T		S																									T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.					.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		L	P	M	V	W	Y	V	P	P	L	S	P	I	Q	S	Y	A	D	A	G	G	L	P	K	S	E	G	V	L	P	A	I	E	S	L	R	I	P	V	Q	Y	L	A	N	M	L	S	A	.	.	.	.	G	D	T	G	P	V	L	R	A	L	K	R	M	M	A	M	R	H	Y	M	R	S	Q	T	V	E	G	V
Query Conservation																																																		.	.	.	.
Alig confidence											.	.																																						.	.	.	.																				.	.
Template Conservation											.	.																																																													.	.
Template Sequence		L	P	Q	F	T	S	C	C	P	.	.	G	W	Q	K	Y	A	E	T	Y	Y	P	E	L	L	P	H	F	S	T	C	K	S	P	I	G	M	N	G	A	L	A	K	T	Y	G	A	E	R	M	K	Y	D	P	K	Q	V	Y	T	V	S	I	M	P	C	I	A	K	K	Y	E	.	.	G	L	R	P	E	L	K
Template Known Secondary structure		S	S								.	.											G	G	G	G	G	G	B		S													T	T							T			G	G	G								S		S						.	.		T		T	T
Template Predicted Secondary structure											.	.																																																													.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.				.	.	480	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		T	D	T	R	A	I	D	E	V	G	L	S	V	A	Q	V	E	E	M	Y	R	Y	L	A	I	A	N	Y	E	D	R	F	V	I	P	T	S	H	R	E	M	A	G	D	A	F	A	E	R	N	G	C	G	.	.	.	F	T	F	G	D	G
Query Conservation																																																							.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		S	S	G	M	R	D	I	D	A	T	L	T	T	R	E	L	A	Y	M	I	.	.	.	.	.	.	.	.	K	K	A	G	I	D	F	A	K	L	P	D	G	K	R	D	S	L	M	G	E	S	T	G	G	A	T	I	F	G	V	T	G	G
Template Known Secondary structure		T	T	S	S		S															.	.	.	.	.	.	.	.			T	T			G	G	G								T	T	T									G	G	G	S	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions